RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 GRAMD1BQ3KR37 738 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 PDZK1Q5T2W1 519 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 SLC30A6Q6NXT4 461 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 TUBA3EQ6PEY2 450 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 FKBP9P1Q75LS8 142 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 PACS2Q86VP3 889 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 SPATA24Q86W54 205 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 ZNF440Q8IYI8 595 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 C10orf111Q8N326 155 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 TMCO5AQ8N6Q1 288 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 PSD4Q8NDX1 1056 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 OR10G3Q8NGC4 313 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 C9orf43Q8TAL5 461 aaPredicted RBP10.06□□□□□ -0.8
VARS2-210ENST00000490699 PHOSPHO1Q8TCT1 267 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 HAS2Q92819 552 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 EXTL1Q92935 676 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 TPD52L3Q96J77 140 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 SMAD5Q99717 465 aaKnown RBP10.06□□□□□ -0.8
VARS2-210ENST00000490699 PINK1Q9BXM7 581 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 UGT2B28Q9BY64 529 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 ADNPQ9H2P0 1102 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 ZNF552Q9H707 407 aaPredicted RBP10.06□□□□□ -0.8
VARS2-210ENST00000490699 RUBCNLQ9H714 662 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 GORASP2Q9H8Y8 452 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 ANKRD10Q9NXR5 420 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 PPP4R1LQ9P1A2 415 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 B4GALT7Q9UBV7 327 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 TUBD1Q9UJT1 453 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 BOKQ9UMX3 212 aaPredicted RBP10.06□□□□□ -0.8
VARS2-210ENST00000490699 ZNF443Q9Y2A4 671 aaPredicted RBP10.06□□□□□ -0.8
VARS2-210ENST00000490699 GPC6Q9Y625 555 aaPredicted RBP10.06□□□□□ -0.8
VARS2-210ENST00000490699 DSPPQ9NZW4 1301 aa10.06□□□□□ -0.8
VARS2-210ENST00000490699 CPAMD8Q8IZJ3 1885 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 PCSK5Q92824 1860 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 TRAV17A0A0B4J275 112 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 SERINC4A6NH21 518 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 ALG1L2C9J202 215 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 KLRC4-KLRK1H3BQV0 150 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 CYP7B1O75881 506 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 OXSR1O95747 527 aaPredicted RBP10.05□□□□□ -0.8
VARS2-210ENST00000490699 SERPINA1P01009 418 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 IGKV1D-16P01601 117 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 NID1P14543 1247 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 NCK1P16333 377 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 PSMA4P25789 261 aaKnown RBP10.05□□□□□ -0.8
VARS2-210ENST00000490699 CD96P40200 585 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 PCBP3P57721 371 aaKnown RBP10.05□□□□□ -0.8
VARS2-210ENST00000490699 C17orf67Q0P5P2 114 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 KCNAB2Q13303 367 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 FAM98BQ52LJ0 330 aaKnown RBP10.05□□□□□ -0.8
VARS2-210ENST00000490699 CYBRD1Q53TN4 286 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 RNF220Q5VTB9 566 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 LCN8Q6JVE9 175 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 PGM2L1Q6PCE3 622 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 ZNF550Q7Z398 422 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 RANBP3LQ86VV4 465 aaPredicted RBP10.05□□□□□ -0.8
VARS2-210ENST00000490699 PAQR8Q8TEZ7 354 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 STMN2Q93045 179 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 ZNF597Q96LX8 424 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 DOHHQ9BU89 302 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 PCDHAC1Q9H158 963 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 PTGES2Q9H7Z7 377 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 YY1AP1Q9H869 796 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 SLC7A8Q9UHI5 535 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 POMPQ9Y244 141 aa10.05□□□□□ -0.8
VARS2-210ENST00000490699 WDFY3Q8IZQ1 3526 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 NCOR2Q9Y618 2525 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 NPIPA5A0A0B4J1W7 369 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 PRAMEF27A3QJZ7 478 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 ANKRD33BA6NCL7 494 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 AQP12BA6NM10 295 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 NPIPA7E9PJI5 369 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 ACOT7O00154 380 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 SYT5O00445 386 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 ZNF264O43296 627 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 MAN1A2O60476 641 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 UGT2B17O75795 530 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 ANGPTL1O95841 491 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 NUDT14O95848 222 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 F10P00742 488 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 OPN1SWP03999 348 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 C8BP07358 591 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 NPIPA8P0DM63 369 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 UMPSP11172 480 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 ELAVL4P26378 380 aaKnown RBP10.04□□□□□ -0.8
VARS2-210ENST00000490699 MSX1P28360 303 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 MSX2P35548 267 aaPredicted RBP10.04□□□□□ -0.8
VARS2-210ENST00000490699 SLC6A8P48029 635 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 CCR4P51679 360 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 COPZ1P61923 177 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 SELENOWP63302 87 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 KCNJ10P78508 379 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 FGFBP1Q14512 234 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 FXNQ16595 210 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 IFI44LQ53G44 452 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 PRAMEF20Q5VT98 475 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 SLC25A25Q6KCM7 469 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 TMEM81Q6P7N7 255 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 DHRS4L2Q6PKH6 230 aa10.04□□□□□ -0.8
VARS2-210ENST00000490699 LYPD8Q6UX82 237 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms