RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 ARPINQ7Z6K5 226 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 CD163Q86VB7 1156 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 RNF130Q86XS8 419 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 TMEM251Q8N6I4 163 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 TRIML2Q8N7C3 387 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 OR56A1Q8NGH5 318 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 MOAP1Q96BY2 351 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 MS4A4EQ96PG1 132 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 DMRTA2Q96SC8 542 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 SECISBP2Q96T21 854 aaKnown RBP9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 CDRT15Q96T59 188 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 TP63Q9H3D4 680 aaPredicted RBP9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 RUBCNLQ9H714 662 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 FOLH1BQ9HBA9 442 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 SPAG4Q9NPE6 437 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 TUBA8Q9NY65 449 aaPredicted RBP9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 SLC7A8Q9UHI5 535 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 CHCHD2Q9Y6H1 151 aaPredicted RBP9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 KCNE3Q9Y6H6 103 aa9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.67□□□□□ -0.86
SCAMP4-208ENST00000489554 A0A1B0GVC2 190 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 ANKRD33BA6NCL7 494 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 HMGN4O00479 90 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 ADAM10O14672 748 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 BCKDKO14874 412 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 ZNHIT1O43257 154 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 SUSD5O60279 629 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 ENTPD5O75356 428 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 CLDN14O95500 239 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 HSD17B1P14061 328 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 HTR1EP28566 365 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 VHLP40337 213 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 MAGEA5P43359 124 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 EEFSECP57772 596 aaKnown RBP9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 PRR5P85299 388 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 PSG6Q00889 435 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 LIPEQ05469 1076 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 LASP1Q14847 261 aaKnown RBP9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 SLC10A1Q14973 349 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 DUSP5Q16690 384 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 SPDYE7PQ495Y7 208 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 PRAMEF20Q5VT98 475 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 CDC73Q6P1J9 531 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 MYO7BQ6PIF6 2116 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 ZZZ3Q8IYH5 903 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 RNF148Q8N7C7 305 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 SLC16A11Q8NCK7 471 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 FAM156AQ8NDB6 213 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 OR10G3Q8NGC4 313 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 OR5D16Q8NGK9 328 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 OR10A6Q8NH74 314 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 FBXO30Q8TB52 745 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 POP5Q969H6 163 aaKnown RBP9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 ADIPOR1Q96A54 375 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 OTUB1Q96FW1 271 aaPredicted RBP9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 SLC35A4Q96G79 324 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 SLC35G5Q96KT7 338 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 YIPF4Q9BSR8 244 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 LMF2Q9BU23 707 aaKnown RBP9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 DOHHQ9BU89 302 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 RSPO3Q9BXY4 272 aaPredicted RBP9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 ITPAQ9BY32 194 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 TRIM15Q9C019 465 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 OR51I1Q9H343 314 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 MUC13Q9H3R2 512 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 C3orf14Q9HBI5 128 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 ZFP64Q9NPA5 681 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 QPCTLQ9NXS2 382 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 B4GALT7Q9UBV7 327 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 CNOT11Q9UKZ1 510 aaKnown RBP9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 NPFFR2Q9Y5X5 522 aa9.66□□□□□ -0.86
SCAMP4-208ENST00000489554 FAM220BPB1ANY3 271 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 NPIPA2E9PIF3 369 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 NPIPA3F8WFD2 350 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 AQP7O14520 342 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 ACOX3O15254 700 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 HCN1O60741 890 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 DNAJA2O60884 412 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 GCM2O75603 506 aaPredicted RBP9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 BCAS2O75934 225 aaPredicted RBP9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 PDE5AO76074 875 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 NKX2-2O95096 273 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 SNX4O95219 450 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 KRT75O95678 551 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 CT45A8P0DMV1 189 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 CT45A9P0DMV2 189 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 ARAFP10398 606 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 NAGAP17050 411 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 MATN1P21941 496 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 PPIBP23284 216 aaKnown RBP9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 CHI3L1P36222 383 aaPredicted RBP9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 CRYBA2P53672 197 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 PRKAG1P54619 331 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 DCAF7P61962 342 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 FADDQ13158 208 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 CT45A2Q5DJT8 189 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 SWT1Q5T5J6 900 aaKnown RBP9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 WLSQ5T9L3 541 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 HEPHL1Q6MZM0 1159 aa9.65□□□□□ -0.86
SCAMP4-208ENST00000489554 TNFAIP8L2Q6P589 184 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms