RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 MIPOL1Q8TD10 442 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 CA5BP1Q8WTZ4 195 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 C1GALT1C1Q96EU7 318 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 OR7D2Q96RA2 312 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 ENKD1Q9H0I2 346 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 SLCO1B3Q9NPD5 702 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 CHST11Q9NPF2 352 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 ALKBH4Q9NXW9 302 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 COQ3Q9NZJ6 369 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 PPP4R1LQ9P1A2 415 aa12.87□□□□□ -0.35
COL9A2-208ENST00000488463 NKX2-6A6NCS4 301 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 CD8B2A6NJW9 211 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 C9JVG2 144 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 CFLARO15519 480 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 HNRNPRO43390 633 aaKnown RBP12.86□□□□□ -0.35
COL9A2-208ENST00000488463 ZNF708P17019 499 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 CHMP24386 653 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 STARP49675 285 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 DGKQP52824 942 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 CLNS1AP54105 237 aaKnown RBP12.86□□□□□ -0.35
COL9A2-208ENST00000488463 NME5P56597 212 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 CLDN15P56746 228 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 CD226Q15762 336 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 DCST2Q5T1A1 773 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL9A2-208ENST00000488463 ANXA8L1Q5VT79 327 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 AP1ARQ63HQ0 302 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 EPGNQ6UW88 154 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 PM20D2Q8IYS1 436 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 TNIP2Q8NFZ5 429 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 OR4K17Q8NGC6 315 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 OR5D16Q8NGK9 328 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 JADE3Q92613 823 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 MARVELD3Q96A59 401 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 CCDC115Q96NT0 180 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 UCN2Q96RP3 112 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 TUBA1CQ9BQE3 449 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 SDHAF3Q9NRP4 125 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 UBQLN4Q9NRR5 601 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 BTNL2Q9UIR0 455 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 CAMK2AQ9UQM7 478 aa12.86□□□□□ -0.35
COL9A2-208ENST00000488463 RNF103-CHMP3A0A140T963 221 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 A0A1W2PQD3 144 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 OR2M5A3KFT3 312 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 MBD3L4A6NDZ8 208 aaPredicted RBP12.85□□□□□ -0.35
COL9A2-208ENST00000488463 MBD3L3A6NE82 208 aaPredicted RBP12.85□□□□□ -0.35
COL9A2-208ENST00000488463 MBD3L5A6NJ08 208 aaPredicted RBP12.85□□□□□ -0.35
COL9A2-208ENST00000488463 KRT16P08779 473 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 TIMP3P35625 211 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 C17orf67Q0P5P2 114 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 GANABQ14697 944 aaKnown RBP12.85□□□□□ -0.35
COL9A2-208ENST00000488463 BCL2A1Q16548 175 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 SPDYE7PQ495Y7 208 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 PDCD4Q53EL6 469 aaKnown RBP12.85□□□□□ -0.35
COL9A2-208ENST00000488463 KLHL26Q53HC5 615 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 SAXO2Q658L1 398 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 HEPHL1Q6MZM0 1159 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 LACC1Q8IV20 430 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 ZNF295-AS1Q8N0V1 137 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 CHDHQ8NE62 594 aaPredicted RBP12.85□□□□□ -0.35
COL9A2-208ENST00000488463 OR4A15Q8NGL6 344 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 MBD3L2Q8NHZ7 208 aaPredicted RBP12.85□□□□□ -0.35
COL9A2-208ENST00000488463 ADAMTS15Q8TE58 950 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 MARK4Q96L34 752 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 SDF2Q99470 211 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 NPAS1Q99742 590 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 SPOCK3Q9BQ16 436 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 TBL1XR1Q9BZK7 514 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 CALHM2Q9HA72 323 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 SDR39U1Q9NRG7 319 aaPredicted RBP12.85□□□□□ -0.35
COL9A2-208ENST00000488463 ZNF446Q9NWS9 450 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 CLCF1Q9UBD9 225 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 KCNE5Q9UJ90 142 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 DKKL1Q9UK85 242 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 FAF1Q9UNN5 650 aaPredicted RBP12.85□□□□□ -0.35
COL9A2-208ENST00000488463 RPH3AQ9Y2J0 694 aaPredicted RBP12.85□□□□□ -0.35
COL9A2-208ENST00000488463 USH1CQ9Y6N9 552 aa12.85□□□□□ -0.35
COL9A2-208ENST00000488463 CELSR1Q9NYQ6 3014 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 NPIPA5A0A0B4J1W7 369 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 PRAMEF27A3QJZ7 478 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 FAM90A27PA6NNH2 459 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 NPIPA7E9PJI5 369 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 OIP5O43482 229 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 SOX30O94993 753 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 CPSF4O95639 269 aaKnown RBP12.84□□□□□ -0.35
COL9A2-208ENST00000488463 PGRP06401 933 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 NPIPA8P0DM63 369 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 IDO1P14902 403 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 MATN1P21941 496 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 UQCRC2P22695 453 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 TCEA1P23193 301 aaKnown RBP12.84□□□□□ -0.35
COL9A2-208ENST00000488463 PSMA4P25789 261 aaKnown RBP12.84□□□□□ -0.35
COL9A2-208ENST00000488463 MSX1P28360 303 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 S100A3P33764 101 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 SOAT1P35610 550 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 CDKN2CP42773 168 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 ZNF136P52737 540 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 FUT5Q11128 374 aa12.84□□□□□ -0.35
COL9A2-208ENST00000488463 GLYR1Q49A26 553 aaPredicted RBP12.84□□□□□ -0.35
COL9A2-208ENST00000488463 BHLHB9Q6PI77 547 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms