RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ANKRD53Q8N9V6 530 aa11.06□□□□□ -0.64
TRA2B-214ENST00000487615 WDR34Q96EX3 536 aa11.06□□□□□ -0.64
TRA2B-214ENST00000487615 ALG8Q9BVK2 526 aa11.06□□□□□ -0.64
TRA2B-214ENST00000487615 LMAN1LQ9HAT1 526 aa11.06□□□□□ -0.64
TRA2B-214ENST00000487615 USP36Q9P275 1121 aaKnown RBP11.06□□□□□ -0.64
TRA2B-214ENST00000487615 TRBV5-3A0A0A0MS03 114 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 H0Y8X5 98 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 SDC3O75056 442 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 RORAP35398 523 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 PLCXD2Q0VAA5 305 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 PRAMEF8Q5VWM4 474 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 PRAMEF7Q5VXH5 474 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 PLXDC1Q8IUK5 500 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 ZNF547Q8IVP9 402 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 TBC1D20Q96BZ9 403 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 HHIPQ96QV1 700 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 OR5M11Q96RB7 305 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 CNN2Q99439 309 aaKnown RBP11.05□□□□□ -0.64
TRA2B-214ENST00000487615 RBM38Q9H0Z9 239 aaKnown RBP11.05□□□□□ -0.64
TRA2B-214ENST00000487615 PIGUQ9H490 435 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 GPN1Q9HCN4 374 aaPredicted RBP11.05□□□□□ -0.64
TRA2B-214ENST00000487615 LAMP5Q9UJQ1 280 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 KRBA1A5PL33 1030 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 MOSPD3O75425 235 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 CFIP05156 583 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 ENDOUP21128 410 aaKnown RBP11.05□□□□□ -0.64
TRA2B-214ENST00000487615 FBLP22087 321 aaKnown RBP11.05□□□□□ -0.64
TRA2B-214ENST00000487615 MMP11P24347 488 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 SLC19A1P41440 591 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 RELAQ04206 551 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 OR1Q1Q15612 314 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 UBE2UQ5VVX9 321 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 KIAA0895LQ68EN5 471 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 DNM1P34Q6PK57 102 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 OR5M3Q8NGP4 307 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 PITX2Q99697 317 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 HOXD1Q9GZZ0 328 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 ERVK-19Q9WJR5 959 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 MAU2Q9Y6X3 613 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 FAM183AA6NL82 134 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 BMP4P12644 408 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 MAPK3P27361 379 aaPredicted RBP11.05□□□□□ -0.64
TRA2B-214ENST00000487615 TPMTP51580 245 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 YBX1P67809 324 aaKnown RBP11.05□□□□□ -0.64
TRA2B-214ENST00000487615 C9orf50Q5SZB4 431 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 TCTN3Q6NUS6 607 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 LINC00299Q6ZSB3 139 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 DNAJA4Q8WW22 397 aaPredicted RBP11.05□□□□□ -0.64
TRA2B-214ENST00000487615 ACOT12Q8WYK0 555 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 NEK6Q9HC98 313 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 SERINC1Q9NRX5 453 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 TESQ9UGI8 421 aaKnown RBP11.05□□□□□ -0.64
TRA2B-214ENST00000487615 ATG2BQ96BY7 2078 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 LGI1O95970 557 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 PEPDP12955 493 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 CFL1P23528 166 aaKnown RBP11.05□□□□□ -0.64
TRA2B-214ENST00000487615 CD6P30203 668 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 MAP3K8P41279 467 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 MAP2K3P46734 347 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 DMPKQ09013 629 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 TMEM196Q5HYL7 178 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 LIN54Q6MZP7 749 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 OR6N2Q8NGY6 317 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 CHPT1Q8WUD6 406 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 FGF14Q92915 247 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 C7orf34Q96L11 122 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 CENPOQ9BU64 300 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 MCOLN1Q9GZU1 580 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 GRIP1Q9Y3R0 1128 aa11.05□□□□□ -0.64
TRA2B-214ENST00000487615 ZNF646O15015 1829 aaPredicted RBP11.05□□□□□ -0.64
TRA2B-214ENST00000487615 NPIPB8E9PQR5 432 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 PLRG1O43660 514 aaKnown RBP11.04□□□□□ -0.64
TRA2B-214ENST00000487615 SRPX2O60687 465 aaPredicted RBP11.04□□□□□ -0.64
TRA2B-214ENST00000487615 GSTT2BP0CG30 244 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 S100A1P23297 94 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 SNRPGP62308 76 aaKnown RBP11.04□□□□□ -0.64
TRA2B-214ENST00000487615 OR2G6Q5TZ20 316 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 SNX29P2Q8IUI4 249 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 THAP4Q8WY91 577 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 NSMAFQ92636 917 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 ITPKCQ96DU7 683 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 TRBV2A0A0J9YWF9 115 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 WWP2O00308 870 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 PRAMEF4O60810 478 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 UGT2B10P36537 528 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 GNALP38405 381 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 VASPP50552 380 aaPredicted RBP11.04□□□□□ -0.64
TRA2B-214ENST00000487615 PDX1P52945 283 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 RAB38P57729 211 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 CD83Q01151 205 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 TEKQ02763 1124 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 HSD17B12Q53GQ0 312 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 PRAMEF9Q5VWM5 478 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 CCDC80Q76M96 950 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 GDPD1Q8N9F7 314 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 OR13H1Q8NG92 308 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 DPAGT1Q9H3H5 408 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 ANKRD19PQ9H560 264 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 KLRF1Q9NZS2 232 aa11.04□□□□□ -0.64
TRA2B-214ENST00000487615 KLHL21Q9UJP4 597 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms