RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 TRIM13O60858 407 aa10.29□□□□□ -0.76
SCFD1-206ENST00000484733 CHEK2O96017 543 aa10.29□□□□□ -0.76
SCFD1-206ENST00000484733 PPP3CBP16298 524 aa10.29□□□□□ -0.76
SCFD1-206ENST00000484733 PSMA4P25789 261 aaKnown RBP10.29□□□□□ -0.76
SCFD1-206ENST00000484733 ASMTP46597 345 aa10.29□□□□□ -0.76
SCFD1-206ENST00000484733 MANFP55145 182 aaKnown RBP10.29□□□□□ -0.76
SCFD1-206ENST00000484733 SIRPAP78324 504 aa10.29□□□□□ -0.76
SCFD1-206ENST00000484733 LRIG3Q6UXM1 1119 aa10.29□□□□□ -0.76
SCFD1-206ENST00000484733 C10orf107Q8IVU9 208 aa10.29□□□□□ -0.76
SCFD1-206ENST00000484733 WDR75Q8IWA0 830 aaKnown RBP10.29□□□□□ -0.76
SCFD1-206ENST00000484733 CCDC63Q8NA47 563 aa10.29□□□□□ -0.76
SCFD1-206ENST00000484733 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.29□□□□□ -0.76
SCFD1-206ENST00000484733 CIDECQ96AQ7 238 aaPredicted RBP10.29□□□□□ -0.76
SCFD1-206ENST00000484733 GMPPAQ96IJ6 420 aaPredicted RBP10.29□□□□□ -0.76
SCFD1-206ENST00000484733 MED18Q9BUE0 208 aa10.29□□□□□ -0.76
SCFD1-206ENST00000484733 TUBB1Q9H4B7 451 aa10.29□□□□□ -0.76
SCFD1-206ENST00000484733 KLHL28Q9NXS3 571 aa10.29□□□□□ -0.76
SCFD1-206ENST00000484733 C6orf203Q9P0P8 240 aaPredicted RBP10.29□□□□□ -0.76
SCFD1-206ENST00000484733 ATP6V1HQ9UI12 483 aa10.29□□□□□ -0.76
SCFD1-206ENST00000484733 NF1P21359 2839 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 RAI1Q7Z5J4 1906 aaPredicted RBP10.28□□□□□ -0.76
SCFD1-206ENST00000484733 LSM1O15116 133 aaKnown RBP10.28□□□□□ -0.76
SCFD1-206ENST00000484733 ADAMDEC1O15204 470 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 NDUFB5O43674 189 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 SS18L1O75177 396 aaPredicted RBP10.28□□□□□ -0.76
SCFD1-206ENST00000484733 AQP8O94778 261 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 KCNK2O95069 426 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 RFX3P48380 749 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 PRIM2P49643 509 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 RAC1P63000 192 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 PCLAFQ15004 111 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 SGCBQ16585 318 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 RFTN2Q52LD8 501 aaPredicted RBP10.28□□□□□ -0.76
SCFD1-206ENST00000484733 CPTPQ5TA50 214 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 MFSD12Q6NUT3 480 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 C20orf204Q6ZNR8 217 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 R3HCC1LQ7Z5L2 792 aaKnown RBP10.28□□□□□ -0.76
SCFD1-206ENST00000484733 OR4C3Q8NH37 302 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 PIK3IP1Q96FE7 263 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 C12orf65Q9H3J6 166 aaKnown RBP10.28□□□□□ -0.76
SCFD1-206ENST00000484733 EQTNQ9NQ60 294 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 UBQLN4Q9NRR5 601 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 EMC9Q9Y3B6 208 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 PTGDR2Q9Y5Y4 395 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 AKAP6Q13023 2319 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 ABCA4P78363 2273 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 SETD2Q9BYW2 2564 aaPredicted RBP10.28□□□□□ -0.76
SCFD1-206ENST00000484733 NPHS1O60500 1241 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 SMPD2O60906 423 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 SOX30O94993 753 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 INHBBP09529 407 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 ALOX5P09917 674 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 KRT4P19013 534 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 SERPINB4P48594 390 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 CTU2Q2VPK5 515 aaKnown RBP10.28□□□□□ -0.76
SCFD1-206ENST00000484733 ANKRD26P1Q6NSI1 321 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 TRABD2AQ86V40 505 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 EXOC3L1Q86VI1 746 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 GSPT2Q8IYD1 628 aaKnown RBP10.28□□□□□ -0.76
SCFD1-206ENST00000484733 UBLCP1Q8WVY7 318 aaPredicted RBP10.28□□□□□ -0.76
SCFD1-206ENST00000484733 TSSK3Q96PN8 268 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 STACQ99469 402 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 FANCFQ9NPI8 374 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 SH3BP4Q9P0V3 963 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 DNAJC15Q9Y5T4 150 aa10.28□□□□□ -0.76
SCFD1-206ENST00000484733 A0A1W2PRB8 838 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 FAM171A2A8MVW0 826 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 EIF1AYO14602 144 aaKnown RBP10.27□□□□□ -0.77
SCFD1-206ENST00000484733 AKAP10O43572 662 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 TMCC2O75069 709 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 RPL3P39023 403 aaKnown RBP10.27□□□□□ -0.77
SCFD1-206ENST00000484733 SLC6A8P48029 635 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 PRKAG1P54619 331 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 DUSP5Q16690 384 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 PLPPR5Q32ZL2 321 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 UGT3A2Q3SY77 523 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 PDSS1Q5T2R2 415 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 ESPNLQ6ZVH7 1005 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 MTERF4Q7Z6M4 381 aaKnown RBP10.27□□□□□ -0.77
SCFD1-206ENST00000484733 NATD1Q8N6N6 113 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 SLC16A11Q8NCK7 471 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 OR10D3Q8NH80 312 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 SLC9A6Q92581 669 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 BTBD2Q9BX70 525 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 DUSP22Q9NRW4 184 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 MED17Q9NVC6 651 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 MCTS1Q9ULC4 181 aaKnown RBP10.27□□□□□ -0.77
SCFD1-206ENST00000484733 VDAC3Q9Y277 283 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 ZNF469Q96JG9 3925 aaPredicted RBP10.27□□□□□ -0.77
SCFD1-206ENST00000484733 SHISA8B8ZZ34 492 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 SYNGR4O95473 234 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 LINC00032P0C843 101 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 BCKDHAP12694 445 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 EIF1AXP47813 144 aaKnown RBP10.27□□□□□ -0.77
SCFD1-206ENST00000484733 KCNJ5P48544 419 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 RPL38P63173 70 aaKnown RBP10.27□□□□□ -0.77
SCFD1-206ENST00000484733 ZAR1Q86SH2 424 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 P3H2Q8IVL5 708 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 OR2V1Q8NHB1 315 aa10.27□□□□□ -0.77
SCFD1-206ENST00000484733 PSMA8Q8TAA3 256 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms