RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 SLC6A8P48029 635 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 ATP1A4Q13733 1029 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 SNCBQ16143 134 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 TCTN3Q6NUS6 607 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 RANBP3LQ86VV4 465 aaPredicted RBP9.35□□□□□ -0.91
USP39-215ENST00000481409 SVOPLQ8N434 492 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 LINC00471Q8N535 108 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 SMYD1Q8NB12 490 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 GPR32P1Q8NGA4 272 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 ASB15Q8WXK1 588 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 SPACA9Q96E40 222 aaPredicted RBP9.35□□□□□ -0.91
USP39-215ENST00000481409 ZNF300Q96RE9 604 aaPredicted RBP9.35□□□□□ -0.91
USP39-215ENST00000481409 RASL10BQ96S79 203 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 CCNL2Q96S94 520 aaPredicted RBP9.35□□□□□ -0.91
USP39-215ENST00000481409 ADOQ96SZ5 270 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 ANKRD19PQ9H560 264 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 CPNE5Q9HCH3 593 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 CNIH4Q9P003 139 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 TESQ9UGI8 421 aaKnown RBP9.35□□□□□ -0.91
USP39-215ENST00000481409 SH3GLB1Q9Y371 365 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 ENPP4Q9Y6X5 453 aa9.35□□□□□ -0.91
USP39-215ENST00000481409 ANKRD33BA6NCL7 494 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 WWP2O00308 870 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 GNGT2O14610 69 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 AP3D1O14617 1153 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 FADS1O60427 444 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 NME6O75414 186 aaPredicted RBP9.34□□□□□ -0.91
USP39-215ENST00000481409 OR2J2O76002 312 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 BAG2O95816 211 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 CSTAP01040 98 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 CAPNS1P04632 268 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 ITGAMP11215 1152 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 CYP4B1P13584 511 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 MSX1P28360 303 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 EVI2BP34910 448 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 CASRP41180 1078 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 HMGA2P52926 109 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 UCNP55089 124 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 SUMO3P55854 103 aaPredicted RBP9.34□□□□□ -0.91
USP39-215ENST00000481409 C17orf67Q0P5P2 114 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 CDC20Q12834 499 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 TGIF1Q15583 401 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 NNATQ16517 81 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 ZNF791Q3KP31 576 aaPredicted RBP9.34□□□□□ -0.91
USP39-215ENST00000481409 GRAMD1BQ3KR37 738 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 IQCCQ4KMZ1 466 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 ACER2Q5QJU3 275 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 PDZK1Q5T2W1 519 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 MRPL2Q5T653 305 aaKnown RBP9.34□□□□□ -0.91
USP39-215ENST00000481409 FAM69BQ5VUD6 431 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 OR2T5Q6IEZ7 315 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 SLC30A6Q6NXT4 461 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 LYPD8Q6UX82 237 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 ZNF836Q6ZNA1 936 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 VTCN1Q7Z7D3 282 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 GALNT10Q86SR1 603 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 CARM1Q86X55 608 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 VRK2Q86Y07 508 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 APLFQ8IW19 511 aaPredicted RBP9.34□□□□□ -0.91
USP39-215ENST00000481409 TMEM156Q8N614 296 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 FAM86B1Q8N7N1 296 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 PIK3C3Q8NEB9 887 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 FAM71CQ8NEG0 241 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 OR2T29Q8NH02 315 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 OR4C3Q8NH37 302 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 HGDQ93099 445 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 EFHD2Q96C19 240 aaPredicted RBP9.34□□□□□ -0.91
USP39-215ENST00000481409 ZG16BQ96DA0 208 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 THOC3Q96J01 351 aaKnown RBP9.34□□□□□ -0.91
USP39-215ENST00000481409 LMF1Q96S06 567 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 PIP5K1AQ99755 562 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 MESP1Q9BRJ9 268 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 MFRPQ9BY79 579 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 TBL1XR1Q9BZK7 514 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 LAT2Q9GZY6 243 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 RNF32Q9H0A6 362 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 VCXQ9H320 206 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 CDCP1Q9H5V8 836 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 CCDC86Q9H6F5 360 aaKnown RBP9.34□□□□□ -0.91
USP39-215ENST00000481409 FBXO34Q9NWN3 711 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 NDUFAF4Q9P032 175 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 RIMS3Q9UJD0 308 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 ACAD8Q9UKU7 415 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 CNOT11Q9UKZ1 510 aaKnown RBP9.34□□□□□ -0.91
USP39-215ENST00000481409 PCDHGB6Q9Y5F9 930 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 MRPS18BQ9Y676 258 aaKnown RBP9.34□□□□□ -0.91
USP39-215ENST00000481409 AHCTF1Q8WYP5 2266 aa9.34□□□□□ -0.91
USP39-215ENST00000481409 CDC14CA4D256 554 aa9.33□□□□□ -0.92
USP39-215ENST00000481409 HTR3EA5X5Y0 456 aa9.33□□□□□ -0.92
USP39-215ENST00000481409 ARRDC5A6NEK1 342 aa9.33□□□□□ -0.92
USP39-215ENST00000481409 H0Y3Z8 333 aa9.33□□□□□ -0.92
USP39-215ENST00000481409 GTPBP1O00178 669 aaKnown RBP9.33□□□□□ -0.92
USP39-215ENST00000481409 RRP8O43159 456 aaKnown RBP9.33□□□□□ -0.92
USP39-215ENST00000481409 ZNF264O43296 627 aa9.33□□□□□ -0.92
USP39-215ENST00000481409 NDUFB5O43674 189 aa9.33□□□□□ -0.92
USP39-215ENST00000481409 PEX1O43933 1283 aa9.33□□□□□ -0.92
USP39-215ENST00000481409 UGT2B11O75310 529 aa9.33□□□□□ -0.92
USP39-215ENST00000481409 TIPRLO75663 272 aa9.33□□□□□ -0.92
USP39-215ENST00000481409 SNX4O95219 450 aa9.33□□□□□ -0.92
USP39-215ENST00000481409 OR5F1O95221 314 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms