RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 SNRPAP09012 282 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 PPP3CBP16298 524 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 TAC1P20366 129 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 EIF1AXP47813 144 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 RFX3P48380 749 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 RPS3AP61247 264 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 VLDLRP98155 873 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 ZNF763Q0D2J5 394 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 C2orf80Q0P641 193 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 FAPQ12884 760 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 LCP2Q13094 533 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 SGCBQ16585 318 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 GLYR1Q49A26 553 aaPredicted RBP8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 LIPNQ5VXI9 398 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 PPP4R4Q6NUP7 873 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 APOOLQ6UXV4 268 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 STAC2Q6ZMT1 411 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 SH2D5Q6ZV89 423 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 OR2L13Q8N349 312 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 OR6K3Q8NGY3 331 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 PLPPR2Q96GM1 343 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 AMDHD1Q96NU7 426 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 TBL1XR1Q9BZK7 514 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 GLIPR2Q9H4G4 154 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 CHODLQ9H9P2 273 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 Q9N2J8 555 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 DDX18Q9NVP1 670 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 SIRT5Q9NXA8 310 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 NFU1Q9UMS0 254 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 EMC9Q9Y3B6 208 aa8.42□□□□□ -1.06
SMARCE1-210ENST00000481231 GXYLT2A0PJZ3 443 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 FAM234BA2RU67 622 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 EIF1AYO14602 144 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 SS18L1O75177 396 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 SLITRK5O94991 958 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 ANGPTL1O95841 491 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 PLGP00747 810 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 IGKV1D-16P01601 117 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 ENO1P06733 434 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 ITGA2P17301 1181 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 IMPDH1P20839 514 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 ATP5F1P24539 256 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 NTSP30990 170 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 GSTM5P46439 218 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 CLK3P49761 638 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 PRKAA2P54646 552 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 PKNOX1P55347 436 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 CTBP2P56545 445 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 DEFA6Q01524 100 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 CKAP4Q07065 602 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 C17orf67Q0P5P2 114 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 ZNHIT3Q15649 155 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 GRAMD1BQ3KR37 738 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 SPDYAQ5MJ70 313 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 HIST2H2BDQ6DRA6 164 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 FAM71E1Q6IPT2 247 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 WFDC8Q8IUA0 241 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 GTPBP8Q8N3Z3 284 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 OR10D3Q8NH80 312 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 RAB3IL1Q8TBN0 382 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 ELP4Q96EB1 424 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 GMPPAQ96IJ6 420 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 ADGRG7Q96K78 797 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 TNFRSF13CQ96RJ3 184 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 FMO2Q99518 471 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 TMEM204Q9BSN7 226 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 LMF2Q9BU23 707 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 PRRG4Q9BZD6 226 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 ACTR6Q9GZN1 396 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 TSPYL1Q9H0U9 437 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 C12orf65Q9H3J6 166 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 MIEF1Q9NQG6 463 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 PLSCR4Q9NRQ2 329 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 TAS2R7Q9NYW3 318 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 TMEM216Q9P0N5 145 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 VDAC3Q9Y277 283 aa8.41□□□□□ -1.06
SMARCE1-210ENST00000481231 UQCRHLA0A096LP55 91 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 EXOC1LA0A1B0GW35 172 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 SERTM1A2A2V5 107 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 SLC35F4A4IF30 521 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 CCDC151A5D8V7 595 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 ADAMDEC1O15204 470 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 CXCL13O43927 109 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 SSX4O60224 188 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 LMX1BO60663 402 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 OPN1LWP04000 364 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 THBS1P07996 1170 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 DANCRP0C864 163 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 IGHV4-31P0DP07 118 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 ZNF17P17021 662 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 IL11P20809 199 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 ECHS1P30084 290 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 GABRA3P34903 492 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 PSMD4P55036 377 aaKnown RBP8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 FOXA1P55317 472 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 PRR5P85299 388 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 ZNF844Q08AG5 666 aa8.4□□□□□ -1.06
SMARCE1-210ENST00000481231 CTU2Q2VPK5 515 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms