RNA–Protein interactions for RNA: ENST00000480884.5

CCDC66-217, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,447 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-217ENST00000480884 NBL1P41271 181 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 PSMD4P55036 377 aaKnown RBP3.45□□□□□ -1.86
CCDC66-217ENST00000480884 PKNOX1P55347 436 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 GPS2Q13227 327 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 TSC22D1Q15714 1073 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 ISXQ2M1V0 245 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 AGAP7PQ5VUJ5 663 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 P4HA3Q7Z4N8 544 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 SNX20Q7Z614 316 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 ZNF546Q86UE3 836 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 GPBP1Q86WP2 473 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 MCOLN2Q8IZK6 566 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 TMEM99Q8N816 258 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 KBTBD3Q8NAB2 608 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 CATSPER1Q8NEC5 780 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 SMPDL3AQ92484 453 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 CCDC127Q96BQ5 260 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 NXPE2Q96DL1 559 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 AGAP4Q96P64 663 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 TMEM121Q9BTD3 319 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 BEX2Q9BXY8 128 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 KLHL31Q9H511 634 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 LPAR2Q9HBW0 351 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 TREX1Q9NSU2 369 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 GPR83Q9NYM4 423 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 NKIRAS1Q9NYS0 192 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 NXT1Q9UKK6 140 aaKnown RBP3.45□□□□□ -1.86
CCDC66-217ENST00000480884 MAD1L1Q9Y6D9 718 aa3.45□□□□□ -1.86
CCDC66-217ENST00000480884 BCLAF3A2AJT9 711 aaKnown RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 C9orf118A6NHY6 69 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 C2CD4BA6NLJ0 364 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 G3V4G9 280 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 MKRN2OSH3BPM6 223 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 PRKAB2O43741 272 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 FCN3O75636 299 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 GP1BAP07359 652 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 NHLRC4P0CG21 123 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 UQCRBP14927 111 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 ZNF23P17027 643 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 PMCHP20382 165 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 BCKDHBP21953 392 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 CMA1P23946 247 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 NPBWR2P48146 333 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 CSNK1A1P48729 337 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 CSNK1DP48730 415 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 GDI2P50395 445 aaKnown RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 EFNB2P52799 333 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 CDH12P55289 794 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 CLDN17P56750 224 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 ARPC4P59998 168 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 PITX1P78337 314 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 ZP4Q12836 540 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 GANABQ14697 944 aaKnown RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 PTPRRQ15256 657 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 SF3B4Q15427 424 aaKnown RBP eCLIP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 EXOC3L4Q17RC7 722 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 ZNF284Q2VY69 593 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 DCAF12Q5T6F0 453 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 DHRS11Q6UWP2 260 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 LANCL3Q6ZV70 420 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 NCCRP1Q6ZVX7 275 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 Q71RC1 249 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 WDR53Q7Z5U6 358 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 MMAAQ8IVH4 418 aaKnown RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 ACOT11Q8WXI4 607 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 NR4A3Q92570 626 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 UPRTQ96BW1 309 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 PPP1R14BQ96C90 147 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 API5Q9BZZ5 524 aaKnown RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 SLC25A51Q9H1U9 297 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 OR51M1Q9H341 326 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 BEX1Q9HBH7 125 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 SLC40A1Q9NP59 571 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 YIPF1Q9Y548 306 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 RAI2Q9Y5P3 530 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 MMP24Q9Y5R2 645 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 AFF2P51816 1311 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 SHISA7A6NL88 538 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 LMO7DNF2Z398 122 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 H3BTX0 84 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 ARPC1BO15143 372 aaKnown RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 TOX3O15405 576 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 P2RX6O15547 441 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 KHDRBS3O75525 346 aaKnown RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 DIRAS1O95057 198 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 TRIM49P0CI25 452 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 TRIM49CP0CI26 452 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 NR2C1P13056 603 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 HOXB8P17481 243 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 LMO1P25800 156 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 BRWD1-AS2P59051 145 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 CX3CL1P78423 397 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 GHRHRQ02643 423 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 SRYQ05066 204 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 MFGE8Q08431 387 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-217ENST00000480884 DGCR6Q14129 220 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 CASP8Q14790 479 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 MAPRE2Q15555 327 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 GABRA6Q16445 453 aa3.44□□□□□ -1.86
CCDC66-217ENST00000480884 SPDYE7PQ495Y7 208 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms