RNA–Protein interactions for RNA: ENST00000480884.5

CCDC66-217, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,447 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-217ENST00000480884 AEBP2Q6ZN18 517 aaPredicted RBP12.11□□□□□ -0.47
CCDC66-217ENST00000480884 CHIC1Q5VXU3 224 aa11.69□□□□□ -0.54
CCDC66-217ENST00000480884 POTEDQ86YR6 584 aa11.23□□□□□ -0.61
CCDC66-217ENST00000480884 SENP3Q9H4L4 574 aaPredicted RBP10.85□□□□□ -0.67
CCDC66-217ENST00000480884 PHF23Q9BUL5 403 aaPredicted RBP10.38□□□□□ -0.75
CCDC66-217ENST00000480884 MSH5O43196 834 aa10.04□□□□□ -0.8
CCDC66-217ENST00000480884 FOXD1Q16676 465 aa9.99□□□□□ -0.81
CCDC66-217ENST00000480884 PIAS4Q8N2W9 510 aaPredicted RBP9.15□□□□□ -0.94
CCDC66-217ENST00000480884 CACNB1Q02641 598 aaPredicted RBP9.09□□□□□ -0.96
CCDC66-217ENST00000480884 EHMT2Q96KQ7 1210 aa9.04□□□□□ -0.96
CCDC66-217ENST00000480884 SLC24A1O60721 1099 aa8.99□□□□□ -0.97
CCDC66-217ENST00000480884 PLPPR3Q6T4P5 718 aa8.68□□□□□ -1.02
CCDC66-217ENST00000480884 POTEHQ6S545 545 aa8.65□□□□□ -1.02
CCDC66-217ENST00000480884 KCNA4P22459 653 aa8.6□□□□□ -1.03
CCDC66-217ENST00000480884 CSRNP3Q8WYN3 585 aa8.56□□□□□ -1.04
CCDC66-217ENST00000480884 RTN4Q9NQC3 1192 aaKnown RBP8.5□□□□□ -1.05
CCDC66-217ENST00000480884 PPP6R1Q9UPN7 881 aa8.41□□□□□ -1.06
CCDC66-217ENST00000480884 DMRT2Q9Y5R5 561 aa8.39□□□□□ -1.07
CCDC66-217ENST00000480884 ADRA2BP18089 450 aa8.38□□□□□ -1.07
CCDC66-217ENST00000480884 RNF39Q9H2S5 420 aa8.29□□□□□ -1.08
CCDC66-217ENST00000480884 C1QBPQ07021 282 aaKnown RBP8.28□□□□□ -1.08
CCDC66-217ENST00000480884 AMER1Q5JTC6 1135 aaPredicted RBP8.21□□□□□ -1.09
CCDC66-217ENST00000480884 SLC4A1APQ9BWU0 796 aaKnown RBP8.19□□□□□ -1.1
CCDC66-217ENST00000480884 SCAF1Q9H7N4 1312 aaKnown RBP8.12□□□□□ -1.11
CCDC66-217ENST00000480884 ZBTB22O15209 634 aa8.03□□□□□ -1.12
CCDC66-217ENST00000480884 NCBP3Q53F19 620 aaKnown RBP8.03□□□□□ -1.12
CCDC66-217ENST00000480884 PRKCSHP14314 528 aaPredicted RBP7.98□□□□□ -1.13
CCDC66-217ENST00000480884 DCAF8L1A6NGE4 600 aa7.97□□□□□ -1.13
CCDC66-217ENST00000480884 MAPK8IP2Q13387 824 aaPredicted RBP7.93□□□□□ -1.14
CCDC66-217ENST00000480884 DNAJC5BQ9UF47 199 aa7.88□□□□□ -1.15
CCDC66-217ENST00000480884 DAXXQ9UER7 740 aaPredicted RBP7.78□□□□□ -1.16
CCDC66-217ENST00000480884 NPM3O75607 178 aaKnown RBP7.76□□□□□ -1.17
CCDC66-217ENST00000480884 PPP4R3CPQ6ZMV5 832 aa7.72□□□□□ -1.17
CCDC66-217ENST00000480884 TAOK2Q9UL54 1235 aa7.7□□□□□ -1.18
CCDC66-217ENST00000480884 HOXD11P31277 338 aaPredicted RBP7.69□□□□□ -1.18
CCDC66-217ENST00000480884 SP7Q8TDD2 431 aaPredicted RBP7.69□□□□□ -1.18
CCDC66-217ENST00000480884 TIMELESSQ9UNS1 1208 aa7.67□□□□□ -1.18
CCDC66-217ENST00000480884 PLCB2Q00722 1185 aa7.63□□□□□ -1.19
CCDC66-217ENST00000480884 FKBP8Q14318 412 aa7.61□□□□□ -1.19
CCDC66-217ENST00000480884 BCANQ96GW7 911 aa7.58□□□□□ -1.2
CCDC66-217ENST00000480884 TPRNQ4KMQ1 711 aa7.58□□□□□ -1.2
CCDC66-217ENST00000480884 TULP1O00294 542 aaPredicted RBP7.53□□□□□ -1.2
CCDC66-217ENST00000480884 HAP1P54257 671 aaPredicted RBP7.51□□□□□ -1.21
CCDC66-217ENST00000480884 DNAJC5Q9H3Z4 198 aa7.51□□□□□ -1.21
CCDC66-217ENST00000480884 FOXD4L1Q9NU39 408 aa7.5□□□□□ -1.21
CCDC66-217ENST00000480884 ARXQ96QS3 562 aa7.5□□□□□ -1.21
CCDC66-217ENST00000480884 PLSCR2Q9NRY7 297 aa7.5□□□□□ -1.21
CCDC66-217ENST00000480884 RNF216Q9NWF9 866 aaPredicted RBP7.4□□□□□ -1.22
CCDC66-217ENST00000480884 KDM2AQ9Y2K7 1162 aa7.4□□□□□ -1.22
CCDC66-217ENST00000480884 DSG3P32926 999 aa7.39□□□□□ -1.23
CCDC66-217ENST00000480884 CHRDL2Q6WN34 429 aa7.36□□□□□ -1.23
CCDC66-217ENST00000480884 RBM42Q9BTD8 480 aaKnown RBP7.36□□□□□ -1.23
CCDC66-217ENST00000480884 FBLN2P98095 1184 aa7.35□□□□□ -1.23
CCDC66-217ENST00000480884 VSIG10Q8N0Z9 540 aa7.34□□□□□ -1.23
CCDC66-217ENST00000480884 GTF3C3Q9Y5Q9 886 aa7.33□□□□□ -1.24
CCDC66-217ENST00000480884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.32□□□□□ -1.24
CCDC66-217ENST00000480884 HOMEZQ8IX15 550 aa7.28□□□□□ -1.24
CCDC66-217ENST00000480884 CNKSR2Q8WXI2 1034 aa7.23□□□□□ -1.25
CCDC66-217ENST00000480884 CAPN15O75808 1086 aa7.23□□□□□ -1.25
CCDC66-217ENST00000480884 DCAF8L2P0C7V8 631 aa7.19□□□□□ -1.26
CCDC66-217ENST00000480884 TMEM132AQ24JP5 1023 aa7.19□□□□□ -1.26
CCDC66-217ENST00000480884 LHX8Q68G74 356 aa7.18□□□□□ -1.26
CCDC66-217ENST00000480884 SLC4A2P04920 1241 aa7.15□□□□□ -1.27
CCDC66-217ENST00000480884 PODXL2Q9NZ53 605 aa7.14□□□□□ -1.27
CCDC66-217ENST00000480884 APLP2Q06481 763 aa7.12□□□□□ -1.27
CCDC66-217ENST00000480884 PKD2Q13563 968 aa7.11□□□□□ -1.27
CCDC66-217ENST00000480884 KLHL34Q8N239 644 aa7.11□□□□□ -1.27
CCDC66-217ENST00000480884 HAX1O00165 279 aa7.11□□□□□ -1.27
CCDC66-217ENST00000480884 NPM1P06748 294 aaKnown RBP eCLIP7.1□□□□□ -1.27
CCDC66-217ENST00000480884 C14orf37Q86TY3 774 aa7.07□□□□□ -1.28
CCDC66-217ENST00000480884 PAXIP1Q6ZW49 1069 aaPredicted RBP7.07□□□□□ -1.28
CCDC66-217ENST00000480884 TSHZ2Q9NRE2 1034 aa7.07□□□□□ -1.28
CCDC66-217ENST00000480884 PCDH10Q9P2E7 1040 aa7.07□□□□□ -1.28
CCDC66-217ENST00000480884 ATXN8OSP0DMR3 200 aa7.06□□□□□ -1.28
CCDC66-217ENST00000480884 CFAP44Q96MT7 982 aa7.04□□□□□ -1.28
CCDC66-217ENST00000480884 RANGAP1P46060 587 aaPredicted RBP7.03□□□□□ -1.28
CCDC66-217ENST00000480884 IFNLR1Q8IU57 520 aaPredicted RBP7.02□□□□□ -1.28
CCDC66-217ENST00000480884 SUPT5HO00267 1087 aaKnown RBP7.02□□□□□ -1.29
CCDC66-217ENST00000480884 SPINK5Q9NQ38 1064 aaPredicted RBP7.02□□□□□ -1.29
CCDC66-217ENST00000480884 ERICH6Q7L0X2 663 aa7□□□□□ -1.29
CCDC66-217ENST00000480884 ATF5Q9Y2D1 282 aaPredicted RBP6.99□□□□□ -1.29
CCDC66-217ENST00000480884 BBXQ8WY36 941 aaPredicted RBP6.98□□□□□ -1.29
CCDC66-217ENST00000480884 ZNF219Q9P2Y4 722 aaPredicted RBP6.98□□□□□ -1.29
CCDC66-217ENST00000480884 TRIM26Q12899 539 aaPredicted RBP6.97□□□□□ -1.29
CCDC66-217ENST00000480884 UBTFP17480 764 aaKnown RBP6.96□□□□□ -1.3
CCDC66-217ENST00000480884 MYCNP04198 464 aaPredicted RBP6.95□□□□□ -1.3
CCDC66-217ENST00000480884 VASPP50552 380 aaPredicted RBP6.95□□□□□ -1.3
CCDC66-217ENST00000480884 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.95□□□□□ -1.3
CCDC66-217ENST00000480884 HRCP23327 699 aa6.93□□□□□ -1.3
CCDC66-217ENST00000480884 PIP4P2Q8N4L2 257 aa6.93□□□□□ -1.3
CCDC66-217ENST00000480884 U3KPZ7 1027 aaPredicted RBP6.92□□□□□ -1.3
CCDC66-217ENST00000480884 NBR1Q14596 966 aa6.92□□□□□ -1.3
CCDC66-217ENST00000480884 NPM2Q86SE8 214 aaKnown RBP6.91□□□□□ -1.3
CCDC66-217ENST00000480884 AKT1S1Q96B36 256 aa6.89□□□□□ -1.31
CCDC66-217ENST00000480884 ILDR1Q86SU0 546 aaPredicted RBP6.88□□□□□ -1.31
CCDC66-217ENST00000480884 FBXO3Q9UK99 471 aa6.88□□□□□ -1.31
CCDC66-217ENST00000480884 TRHP20396 242 aaPredicted RBP6.86□□□□□ -1.31
CCDC66-217ENST00000480884 SPRYD3Q8NCJ5 442 aa6.86□□□□□ -1.31
CCDC66-217ENST00000480884 ABCB7O75027 752 aa6.83□□□□□ -1.32
CCDC66-217ENST00000480884 RGL2O15211 777 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms