RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 KCNE3Q9Y6H6 103 aa21.77■■□□□ 1.08
CPNE1-223ENST00000475146 IGLV3-32A0A0A0MS00 114 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 CD8B2A6NJW9 211 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 SOX30O94993 753 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 IL2RAP01589 272 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 MATN1P21941 496 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 LHX2P50458 406 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 B3GALT5-AS1P59052 145 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 SLC9B1Q4ZJI4 515 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 MEX3BQ6ZN04 569 aaKnown RBP21.76■■□□□ 1.07
CPNE1-223ENST00000475146 MAVSQ7Z434 540 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 LIX1LQ8IVB5 337 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 ZPLD1Q8TCW7 415 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 MARK4Q96L34 752 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 SH3GL2Q99962 352 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 VIPAS39Q9H9C1 493 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 GPR45Q9Y5Y3 372 aa21.76■■□□□ 1.07
CPNE1-223ENST00000475146 NPIPA5A0A0B4J1W7 369 aa21.75■■□□□ 1.07
CPNE1-223ENST00000475146 HMGB1P1B2RPK0 211 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-223ENST00000475146 NPIPA7E9PJI5 369 aa21.75■■□□□ 1.07
CPNE1-223ENST00000475146 DIAPH2O60879 1101 aa21.75■■□□□ 1.07
CPNE1-223ENST00000475146 SCN2BO60939 215 aa21.75■■□□□ 1.07
CPNE1-223ENST00000475146 NPIPA8P0DM63 369 aa21.75■■□□□ 1.07
CPNE1-223ENST00000475146 PRF1P14222 555 aa21.75■■□□□ 1.07
CPNE1-223ENST00000475146 POU3F2P20265 443 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-223ENST00000475146 TIMP3P35625 211 aa21.75■■□□□ 1.07
CPNE1-223ENST00000475146 SLC25A35Q3KQZ1 300 aa21.75■■□□□ 1.07
CPNE1-223ENST00000475146 NAXEQ8NCW5 288 aa21.75■■□□□ 1.07
CPNE1-223ENST00000475146 OR5M1Q8NGP8 315 aa21.75■■□□□ 1.07
CPNE1-223ENST00000475146 DYDC1Q8WWB3 177 aa21.75■■□□□ 1.07
CPNE1-223ENST00000475146 MAELQ96JY0 434 aaKnown RBP21.75■■□□□ 1.07
CPNE1-223ENST00000475146 SERHL2Q9H4I8 314 aa21.75■■□□□ 1.07
CPNE1-223ENST00000475146 NPDC1Q9NQX5 325 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-223ENST00000475146 NAV2Q8IVL1 2488 aa21.75■■□□□ 1.07
CPNE1-223ENST00000475146 IDO1P14902 403 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 ZNF708P17019 499 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 UQCRC2P22695 453 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 CEACAM8P31997 349 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-223ENST00000475146 DGKQP52824 942 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 CLDN18P56856 261 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 TFF3Q07654 80 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 FLYWCH1Q4VC44 716 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 MISPQ8IVT2 679 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 UBQLNLQ8IYU4 475 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 ZNF527Q8NB42 609 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 ACTRT2Q8TDY3 377 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 SH3YL1Q96HL8 342 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-223ENST00000475146 SPOCK3Q9BQ16 436 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 PIGQQ9BRB3 760 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 CALHM2Q9HA72 323 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 VDAC3Q9Y277 283 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 USH1CQ9Y6N9 552 aa21.74■■□□□ 1.07
CPNE1-223ENST00000475146 A0A1W2PQD3 144 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 MBD3L4A6NDZ8 208 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-223ENST00000475146 MBD3L3A6NE82 208 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-223ENST00000475146 MBD3L5A6NJ08 208 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-223ENST00000475146 DUXAA6NLW8 204 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 CLCA1A8K7I4 914 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 DVL2O14641 736 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 PEPDP12955 493 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 BMP5P22003 454 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 MSX1P28360 303 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 IL12AP29459 219 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 CHI3L1P36222 383 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-223ENST00000475146 CASP9P55211 416 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 CD226Q15762 336 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 ARSKQ6UWY0 536 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 CHMP1BQ7LBR1 199 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 GDF7Q7Z4P5 450 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 ZNF614Q8N883 585 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 MBD3L2Q8NHZ7 208 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-223ENST00000475146 C7orf26Q96N11 449 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 OR52B2Q96RD2 323 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 OR52E6Q96RD3 313 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 HOXD1Q9GZZ0 328 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 ENKD1Q9H0I2 346 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 OR51I1Q9H343 314 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 PKDREJQ9NTG1 2253 aa21.73■■□□□ 1.07
CPNE1-223ENST00000475146 KIAA1549Q9HCM3 1950 aa21.72■■□□□ 1.07
CPNE1-223ENST00000475146 OR2M5A3KFT3 312 aa21.72■■□□□ 1.07
CPNE1-223ENST00000475146 H3BML4 177 aa21.72■■□□□ 1.07
CPNE1-223ENST00000475146 PGRP06401 933 aa21.72■■□□□ 1.07
CPNE1-223ENST00000475146 RNF144AP50876 292 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-223ENST00000475146 BCL2A1Q16548 175 aa21.72■■□□□ 1.07
CPNE1-223ENST00000475146 GLYR1Q49A26 553 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-223ENST00000475146 PDCD4Q53EL6 469 aaKnown RBP21.72■■□□□ 1.07
CPNE1-223ENST00000475146 PLXDC2Q6UX71 529 aa21.72■■□□□ 1.07
CPNE1-223ENST00000475146 MEIOBQ8N635 442 aa21.72■■□□□ 1.07
CPNE1-223ENST00000475146 C9orf106Q8NAJ2 232 aa21.72■■□□□ 1.07
CPNE1-223ENST00000475146 GOT1L1Q8NHS2 421 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-223ENST00000475146 PHOSPHO1Q8TCT1 267 aa21.72■■□□□ 1.07
CPNE1-223ENST00000475146 SMPDL3BQ92485 455 aa21.72■■□□□ 1.07
CPNE1-223ENST00000475146 CCDC115Q96NT0 180 aa21.72■■□□□ 1.07
CPNE1-223ENST00000475146 SLC35A5Q9BS91 424 aa21.72■■□□□ 1.07
CPNE1-223ENST00000475146 SLCO1B3Q9NPD5 702 aa21.72■■□□□ 1.07
CPNE1-223ENST00000475146 BTNL2Q9UIR0 455 aa21.72■■□□□ 1.07
CPNE1-223ENST00000475146 NBPF19A0A087WUL8 3843 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 MAST4O15021 2626 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 SHISA8B8ZZ34 492 aa21.71■■□□□ 1.07
CPNE1-223ENST00000475146 H3BNH8 94 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms