RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 HYOU1Q9Y4L1 999 aa6.99□□□□□ -1.29
USP54-211ENST00000474929 HEATR1Q9H583 2144 aaKnown RBP6.98□□□□□ -1.29
USP54-211ENST00000474929 C7orf72A4D263 438 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 GOLGA8KD6RF30 607 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 TNFSF11O14788 317 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 RGS14O43566 566 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 LIASO43766 372 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 SCO2O43819 266 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 BCAS2O75934 225 aaPredicted RBP6.98□□□□□ -1.29
USP54-211ENST00000474929 WDR47O94967 919 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 TBX6O95947 436 aaPredicted RBP6.98□□□□□ -1.29
USP54-211ENST00000474929 WNT11O96014 354 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 AVPP01185 164 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 GRIA1P42261 906 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 ATP4BP51164 291 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 GAS1P54826 345 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 HADHBP55084 474 aaKnown RBP6.98□□□□□ -1.29
USP54-211ENST00000474929 GDF10P55107 478 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 TMEM33P57088 247 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 CARD18P57730 90 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 TPM4P67936 248 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 CHRNEQ04844 493 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 SLC9A3R2Q15599 337 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 CYP27C1Q4G0S4 372 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 LGSNQ5TDP6 509 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 C18orf63Q68DL7 685 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 DESI1Q6ICB0 168 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 OR4C11Q6IEV9 310 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 C11orf63Q6NUN7 778 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 KLHL24Q6TFL4 600 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 CES3Q6UWW8 571 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 IKBIPQ70UQ0 350 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 LARP4Q71RC2 724 aaKnown RBP eCLIP6.98□□□□□ -1.29
USP54-211ENST00000474929 FCRLAQ7L513 359 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 VN1R5Q7Z5H4 357 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 GTPBP8Q8N3Z3 284 aaPredicted RBP6.98□□□□□ -1.29
USP54-211ENST00000474929 NKAPQ8N5F7 415 aaKnown RBP6.98□□□□□ -1.29
USP54-211ENST00000474929 C1orf162Q8NEQ5 155 aaPredicted RBP6.98□□□□□ -1.29
USP54-211ENST00000474929 DOK4Q8TEW6 326 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 SGCDQ92629 289 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 OSTF1Q92882 214 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 RGMAQ96B86 450 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 CMTM7Q96FZ5 175 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 KLHL15Q96M94 604 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 C1orf147Q96MC9 270 aaPredicted RBP6.98□□□□□ -1.29
USP54-211ENST00000474929 EGFL8Q99944 293 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 FAM118BQ9BPY3 351 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 KATNB1Q9BVA0 655 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 GATA5Q9BWX5 397 aaPredicted RBP6.98□□□□□ -1.29
USP54-211ENST00000474929 C7orf69Q9H7B7 122 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 SAYSD1Q9NPB0 183 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 RAB6BQ9NRW1 208 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 AURKAIP1Q9NWT8 199 aaPredicted RBP6.98□□□□□ -1.29
USP54-211ENST00000474929 SOX13Q9UN79 622 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 TRAF6Q9Y4K3 522 aa6.98□□□□□ -1.29
USP54-211ENST00000474929 XPNPEP2O43895 674 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 AKR1B10O60218 316 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 PIP5K1CO60331 668 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 TSPAN2O60636 221 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 CLPXO76031 633 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 SLU7O95391 586 aaKnown RBP6.97□□□□□ -1.29
USP54-211ENST00000474929 CRYAAP02489 173 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 OR4A8P0C604 315 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 SELEP16581 610 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 ELK4P28324 431 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 CTNNA1P35221 906 aaKnown RBP6.97□□□□□ -1.29
USP54-211ENST00000474929 UBASH3AP57075 661 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 PHEXP78562 749 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 MRPS11P82912 194 aaKnown RBP6.97□□□□□ -1.29
USP54-211ENST00000474929 TGFBR3Q03167 851 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 SRSF4Q08170 494 aaKnown RBP6.97□□□□□ -1.29
USP54-211ENST00000474929 DCTN2Q13561 401 aaKnown RBP6.97□□□□□ -1.29
USP54-211ENST00000474929 NR1I3Q14994 352 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 ADIPOQQ15848 244 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 MMEL1Q495T6 779 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 KHDRBS2Q5VWX1 349 aaKnown RBP6.97□□□□□ -1.29
USP54-211ENST00000474929 CYP20A1Q6UW02 462 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 UBE3DQ7Z6J8 389 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 ZNF100Q8IYN0 542 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 OR4F15Q8NGB8 312 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 OR4K14Q8NGD5 310 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 OR5M1Q8NGP8 315 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 UHMK1Q8TAS1 419 aaKnown RBP6.97□□□□□ -1.29
USP54-211ENST00000474929 ERP27Q96DN0 273 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 WDR34Q96EX3 536 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 ANKRD27Q96NW4 1050 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 BBS4Q96RK4 519 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 PSD2Q9BQI7 771 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 FAM167BQ9BTA0 163 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 MCMBPQ9BTE3 642 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 C1QTNF5Q9BXJ0 243 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 BRINP2Q9C0B6 783 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 NARFLQ9H6Q4 476 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 ZNF442Q9H7R0 627 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 ZNF665Q9H7R5 613 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 CNOT10Q9H9A5 744 aaKnown RBP6.97□□□□□ -1.29
USP54-211ENST00000474929 FBXO6Q9NRD1 293 aaPredicted RBP6.97□□□□□ -1.29
USP54-211ENST00000474929 IARS2Q9NSE4 1012 aaKnown RBP6.97□□□□□ -1.29
USP54-211ENST00000474929 OXSMQ9NWU1 459 aa6.97□□□□□ -1.29
USP54-211ENST00000474929 TREM2Q9NZC2 230 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms