RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 TMBIM4Q9HC24 238 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 KCNE3Q9Y6H6 103 aa16.22■□□□□ 0.19
UPF3A-203ENST00000474056 OR2M5A3KFT3 312 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 SHISA8B8ZZ34 492 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 NDUFB5O43674 189 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 TMIGD3P0DMS9 266 aaPredicted RBP16.21■□□□□ 0.19
UPF3A-203ENST00000474056 LBPP18428 481 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 POU3F2P20265 443 aaPredicted RBP16.21■□□□□ 0.19
UPF3A-203ENST00000474056 TBXA2RP21731 343 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 CTSSP25774 331 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 SOAT1P35610 550 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 DGKQP52824 942 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 FOXF2Q12947 444 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 ARSKQ6UWY0 536 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 UBQLNLQ8IYU4 475 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 ADAMTS15Q8TE58 950 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 UCN2Q96RP3 112 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 MCCC2Q9HCC0 563 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 GIN1Q9NXP7 522 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 VDAC3Q9Y277 283 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 ZNF337Q9Y3M9 751 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 L3MBTL1Q9Y468 752 aa16.21■□□□□ 0.19
UPF3A-203ENST00000474056 NPIPA5A0A0B4J1W7 369 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 NPIPA7E9PJI5 369 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 H0YC42 278 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 H3BML4 177 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 SDHDO14521 159 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 ANKRD28O15084 1053 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 HCRTR2O43614 444 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 SNNO75324 88 aaPredicted RBP16.2■□□□□ 0.18
UPF3A-203ENST00000474056 NPIPA8P0DM63 369 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 PEPDP12955 493 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 LCN1P31025 176 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 UQCRC1P31930 480 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 SUCLG1P53597 346 aaKnown RBP16.2■□□□□ 0.18
UPF3A-203ENST00000474056 TPD52P55327 224 aaPredicted RBP16.2■□□□□ 0.18
UPF3A-203ENST00000474056 CLDN15P56746 228 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 BCL2A1Q16548 175 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 GRAMD2AQ8IUY3 354 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 WNT2BQ93097 391 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 MOAP1Q96BY2 351 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 KCNN3Q9UGI6 736 aa16.2■□□□□ 0.18
UPF3A-203ENST00000474056 FAF1Q9UNN5 650 aaPredicted RBP16.2■□□□□ 0.18
UPF3A-203ENST00000474056 A0A1W2PQD3 144 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 SYT5O00445 386 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 RNASET2O00584 256 aaKnown RBP16.19■□□□□ 0.18
UPF3A-203ENST00000474056 SCDO00767 359 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 SEC14L5O43304 696 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 SCN2BO60939 215 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 RCBTB2O95199 551 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 ALDOCP09972 364 aaKnown RBP16.19■□□□□ 0.18
UPF3A-203ENST00000474056 HPGDP15428 266 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 OPRM1P35372 400 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 SLC18A1P54219 525 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 RPS26P62854 115 aaKnown RBP16.19■□□□□ 0.18
UPF3A-203ENST00000474056 PHC1P78364 1004 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 MYBPHQ13203 477 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 CD226Q15762 336 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 FBXL19-AS1Q494R0 122 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 DCST2Q5T1A1 773 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 LRRC34Q8IZ02 419 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 GCNT2Q8N0V5 402 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 CLEC4FQ8N1N0 589 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 OR8J2Q8NGG1 315 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 OR5D16Q8NGK9 328 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 RNASE6Q93091 150 aaKnown RBP16.19■□□□□ 0.18
UPF3A-203ENST00000474056 INTS12Q96CB8 462 aaKnown RBP16.19■□□□□ 0.18
UPF3A-203ENST00000474056 SH3YL1Q96HL8 342 aaPredicted RBP16.19■□□□□ 0.18
UPF3A-203ENST00000474056 OR7D2Q96RA2 312 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 NPAS1Q99742 590 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 TM9SF2Q99805 663 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 KLHDC3Q9BQ90 382 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 ZNF559Q9BR84 538 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 PIGQQ9BRB3 760 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 SERHL2Q9H4I8 314 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 UBQLN4Q9NRR5 601 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 THAP1Q9NVV9 213 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 MARCOQ9UEW3 520 aaPredicted RBP16.19■□□□□ 0.18
UPF3A-203ENST00000474056 ANKRD17O75179 2603 aaKnown RBP16.19■□□□□ 0.18
UPF3A-203ENST00000474056 SPG11Q96JI7 2443 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 AKAP6Q13023 2319 aa16.19■□□□□ 0.18
UPF3A-203ENST00000474056 EEF1E1-BLOC1S5C9J1V9 151 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 EEF1E1O43324 174 aaKnown RBP16.18■□□□□ 0.18
UPF3A-203ENST00000474056 TGM6O95932 706 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 IL18BPO95998 194 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 KRT16P08779 473 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 KITP10721 976 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 CLDN20P56880 219 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 CASP8Q14790 479 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 TMEM44Q2T9K0 475 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 GLYR1Q49A26 553 aaPredicted RBP16.18■□□□□ 0.18
UPF3A-203ENST00000474056 OGFOD2Q6N063 350 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 ANKRD46Q86W74 232 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 MEIOBQ8N635 442 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 OR4A15Q8NGL6 344 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 SMPDL3BQ92485 455 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 TESCQ96BS2 214 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 ZFP3Q96NJ6 502 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 NKIRAS1Q9NYS0 192 aa16.18■□□□□ 0.18
UPF3A-203ENST00000474056 JKAMPQ9P055 326 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms