RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 INPP5EQ9NRR6 644 aa9.89□□□□□ -0.83
APLF-204ENST00000471727 POMT2Q9UKY4 750 aa9.89□□□□□ -0.83
APLF-204ENST00000471727 CLCA2Q9UQC9 943 aa9.89□□□□□ -0.83
APLF-204ENST00000471727 SF3B6Q9Y3B4 125 aaKnown RBP9.89□□□□□ -0.83
APLF-204ENST00000471727 CMAHPQ9Y471 501 aa9.89□□□□□ -0.83
APLF-204ENST00000471727 TICRRQ7Z2Z1 1910 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 BOLA2-SMG1P6H3BVE0 249 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 CTDSP2O14595 271 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 CDRT1O95170 752 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 THY1P04216 161 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 LIMS3P0CW19 117 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 LIMS4P0CW20 117 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 THEGLP0DJG4 465 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 IMPDH2P12268 514 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 CD53P19397 219 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 DRD5P21918 477 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 PAICSP22234 425 aaKnown RBP9.88□□□□□ -0.83
APLF-204ENST00000471727 CFL1P23528 166 aaKnown RBP9.88□□□□□ -0.83
APLF-204ENST00000471727 SOX18P35713 384 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 RBM34P42696 430 aaKnown RBP9.88□□□□□ -0.83
APLF-204ENST00000471727 LSSP48449 732 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 RNF144AP50876 292 aaPredicted RBP9.88□□□□□ -0.83
APLF-204ENST00000471727 PSPHP78330 225 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 SHC2P98077 582 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 HHEXQ03014 270 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 EIF2B5Q13144 721 aaKnown RBP9.88□□□□□ -0.83
APLF-204ENST00000471727 AMZ1Q400G9 498 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 MRPL2Q5T653 305 aaKnown RBP9.88□□□□□ -0.83
APLF-204ENST00000471727 COL13A1Q5TAT6 717 aaPredicted RBP9.88□□□□□ -0.83
APLF-204ENST00000471727 PAQR6Q6TCH4 344 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 C7orf57Q8NEG2 295 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 TMEM255BQ8WV15 326 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 HMGB4Q8WW32 186 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 OIT3Q8WWZ8 545 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 ANKRD9Q96BM1 317 aaPredicted RBP9.88□□□□□ -0.83
APLF-204ENST00000471727 C1GALT1C1Q96EU7 318 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 KCNS3Q9BQ31 491 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 TRIM2Q9C040 744 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 UBQLN3Q9H347 655 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.88□□□□□ -0.83
APLF-204ENST00000471727 SNTG1Q9NSN8 517 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 SIDT1Q9NXL6 827 aaKnown RBP9.88□□□□□ -0.83
APLF-204ENST00000471727 QPCTLQ9NXS2 382 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 ZNF223Q9UK11 482 aaPredicted RBP9.88□□□□□ -0.83
APLF-204ENST00000471727 POLHQ9Y253 713 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 CAB39Q9Y376 341 aaPredicted RBP9.88□□□□□ -0.83
APLF-204ENST00000471727 MED31Q9Y3C7 131 aa9.88□□□□□ -0.83
APLF-204ENST00000471727 HTR3EA5X5Y0 456 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 RGS5O15539 181 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 OR10H2O60403 315 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 HCN1O60741 890 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 LDB3O75112 727 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 DLGAP3O95886 979 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 RNH1P13489 461 aaKnown RBP9.87□□□□□ -0.83
APLF-204ENST00000471727 PTBP1P26599 531 aaKnown RBP eCLIP9.87□□□□□ -0.83
APLF-204ENST00000471727 BMP8BP34820 402 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 GABRA3P34903 492 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 ATP6V1E1P36543 226 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 LTBRP36941 435 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 GPR4P46093 362 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 GCGRP47871 477 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 VSX2P58304 361 aaPredicted RBP9.87□□□□□ -0.83
APLF-204ENST00000471727 COL19A1Q14993 1142 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 CRTC2Q53ET0 693 aaPredicted RBP9.87□□□□□ -0.83
APLF-204ENST00000471727 CLEC12AQ5QGZ9 265 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 GARNL3Q5VVW2 1013 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 SLC30A6Q6NXT4 461 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 XKRXQ6PP77 449 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 MEPCEQ7L2J0 689 aaKnown RBP9.87□□□□□ -0.83
APLF-204ENST00000471727 CXXC5Q7LFL8 322 aaKnown RBP9.87□□□□□ -0.83
APLF-204ENST00000471727 ZNF550Q7Z398 422 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 DGLUCYQ7Z3D6 616 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 ZNF438Q7Z4V0 828 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 BMP8AQ7Z5Y6 402 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 SNX29P2Q8IUI4 249 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 CMIPQ8IY22 773 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 ZNF595Q8IYB9 648 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 SLC22A18ASQ8N1D0 253 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 VWA5B2Q8N398 1253 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 LNX2Q8N448 690 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 GDPD1Q8N9F7 314 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 FAM181AQ8N9Y4 354 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 ZNF485Q8NCK3 441 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 ZDHHC1Q8WTX9 485 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 GATAD2BQ8WXI9 593 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 KLHDC7BQ96G42 594 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 TXNDC15Q96J42 360 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 SAMD8Q96LT4 415 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 LRFN5Q96NI6 719 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.87□□□□□ -0.83
APLF-204ENST00000471727 BARHL1Q9BZE3 327 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 OR52D1Q9H346 318 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 CD93Q9NPY3 652 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 EVA1BQ9NVM1 165 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 IRAK4Q9NWZ3 460 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 WSB2Q9NYS7 404 aaPredicted RBP9.87□□□□□ -0.83
APLF-204ENST00000471727 NPAP1Q9NZP6 1156 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 TNFRSF10DQ9UBN6 386 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 PAIP2BQ9ULR5 123 aaKnown RBP9.87□□□□□ -0.83
APLF-204ENST00000471727 CBLCQ9ULV8 474 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms