RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 EML6Q6ZMW3 1958 aa8.28□□□□□ -1.08
SF3A1-206ENST00000471037 TRBV5-3A0A0A0MS03 114 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 OR6C76A6NM76 312 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 WASHC1A8K0Z3 465 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 FXYD1O00168 92 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 HRKO00198 91 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 GYG2O15488 501 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 TRIM3O75382 744 aaPredicted RBP8.27□□□□□ -1.09
SF3A1-206ENST00000471037 ANP32DO95626 131 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 CPSF4O95639 269 aaKnown RBP8.27□□□□□ -1.09
SF3A1-206ENST00000471037 ATP1B1P05026 303 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 HPNP05981 417 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 IFI6P09912 130 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 SLC35E2P0CK97 266 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 EPXP11678 715 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 GALNSP34059 522 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 GPC1P35052 558 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 CPOXP36551 454 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 FEN1P39748 380 aaKnown RBP8.27□□□□□ -1.09
SF3A1-206ENST00000471037 NCBP2P52298 156 aaKnown RBP eCLIP8.27□□□□□ -1.09
SF3A1-206ENST00000471037 ZNF136P52737 540 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 NCALDP61601 193 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 HBA1P69905 142 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 SORDQ00796 357 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 HSPB3Q12988 150 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 DUSP8Q13202 625 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 EBPQ15125 230 aaKnown RBP8.27□□□□□ -1.09
SF3A1-206ENST00000471037 SF3B4Q15427 424 aaKnown RBP eCLIP8.27□□□□□ -1.09
SF3A1-206ENST00000471037 NHSL2Q5HYW2 709 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 C8orf82Q6P1X6 216 aaPredicted RBP8.27□□□□□ -1.09
SF3A1-206ENST00000471037 DLEU7Q6UYE1 221 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 DNAJC14Q6Y2X3 702 aaPredicted RBP8.27□□□□□ -1.09
SF3A1-206ENST00000471037 TMEM64Q6YI46 380 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 DGAT2L6Q6ZPD8 337 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 RINLQ6ZS11 566 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 SLC29A4Q7RTT9 530 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 KIF18BQ86Y91 864 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 OR4N5Q8IXE1 308 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 PM20D2Q8IYS1 436 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 ST13P4Q8IZP2 240 aaPredicted RBP8.27□□□□□ -1.09
SF3A1-206ENST00000471037 FAM13CQ8NE31 585 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 WFDC11Q8NEX6 87 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 PSMA8Q8TAA3 256 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 ZNF675Q8TD23 568 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 MOAP1Q96BY2 351 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 HSPBAP1Q96EW2 488 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 ZNF597Q96LX8 424 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 CGREF1Q99674 301 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 TIMP4Q99727 224 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 SH3GL1Q99961 368 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 BTBD10Q9BSF8 475 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 INPP5KQ9BT40 448 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 DOHHQ9BU89 302 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 WWTR1Q9GZV5 400 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 PAIP1Q9H074 479 aaKnown RBP8.27□□□□□ -1.09
SF3A1-206ENST00000471037 UBQLN3Q9H347 655 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 GLIPR2Q9H4G4 154 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 TAS2R1Q9NYW7 299 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.27□□□□□ -1.09
SF3A1-206ENST00000471037 AP3M1Q9Y2T2 418 aa8.27□□□□□ -1.09
SF3A1-206ENST00000471037 MBD3L4A6NDZ8 208 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 MBD3L3A6NE82 208 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 TUBAL3A6NHL2 446 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 MBD3L5A6NJ08 208 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 CD8B2A6NJW9 211 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 KDM4EB2RXH2 506 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 TP53I11O14683 189 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 OR10H2O60403 315 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 IL18BPO95998 194 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 IL2RAP01589 272 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 CLPSP04118 112 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 ABCB1P08183 1280 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 HOXB9P17482 250 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 EFNA1P20827 205 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 UQCRC2P22695 453 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 PPIBP23284 216 aaKnown RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 GDF1P27539 372 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 PTPN6P29350 595 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 HOXC12P31275 282 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 SOAT1P35610 550 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 CDKN2CP42773 168 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 SLC37A1P57057 533 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 PSME3P61289 254 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 SLC25A3Q00325 362 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 LTBQ06643 244 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 KEAP1Q14145 624 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 C6orf163Q5TEZ5 329 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 NSUN5P2Q63ZY6 315 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 VASNQ6EMK4 673 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 FAM180BQ6P0A1 224 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 BHLHB9Q6PI77 547 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 RNF111Q6ZNA4 994 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 ZNF621Q6ZSS3 439 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 ASRGL1Q7L266 308 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 ZNF551Q7Z340 670 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-206ENST00000471037 CCDC116Q8IYX3 515 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 DEFB107AQ8IZN7 70 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 TAGAPQ8N103 731 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 ARHGAP24Q8N264 748 aa8.26□□□□□ -1.09
SF3A1-206ENST00000471037 ZNF441Q8N8Z8 693 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms