RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 KDM8Q8N371 416 aa3.59□□□□□ -1.83
SSB-209ENST00000470621 BBS1Q8NFJ9 593 aa3.59□□□□□ -1.83
SSB-209ENST00000470621 FCGR1BQ92637 280 aa3.59□□□□□ -1.83
SSB-209ENST00000470621 VPS39Q96JC1 886 aa3.59□□□□□ -1.83
SSB-209ENST00000470621 CNPY3Q9BT09 278 aa3.59□□□□□ -1.83
SSB-209ENST00000470621 COMMD4Q9H0A8 199 aa3.59□□□□□ -1.83
SSB-209ENST00000470621 ACTR8Q9H981 624 aa3.59□□□□□ -1.83
SSB-209ENST00000470621 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.59□□□□□ -1.83
SSB-209ENST00000470621 OR1A1Q9P1Q5 309 aa3.59□□□□□ -1.83
SSB-209ENST00000470621 ONECUT1Q9UBC0 465 aa3.59□□□□□ -1.83
SSB-209ENST00000470621 GALPQ9UBC7 116 aa3.59□□□□□ -1.83
SSB-209ENST00000470621 MOSPD1Q9UJG1 213 aa3.59□□□□□ -1.83
SSB-209ENST00000470621 UBE4BO95155 1302 aa3.59□□□□□ -1.83
SSB-209ENST00000470621 GTF3C1Q12789 2109 aa3.59□□□□□ -1.84
SSB-209ENST00000470621 IGKV6D-21A0A0A0MT36 114 aa3.58□□□□□ -1.84
SSB-209ENST00000470621 EFNA2O43921 213 aa3.58□□□□□ -1.84
SSB-209ENST00000470621 TIMP1P01033 207 aa3.58□□□□□ -1.84
SSB-209ENST00000470621 ANXA3P12429 323 aa3.58□□□□□ -1.84
SSB-209ENST00000470621 TMEM184AQ6ZMB5 413 aa3.58□□□□□ -1.84
SSB-209ENST00000470621 VPS36Q86VN1 386 aa3.58□□□□□ -1.84
SSB-209ENST00000470621 EFCAB13Q8IY85 973 aa3.58□□□□□ -1.84
SSB-209ENST00000470621 M1APQ8TC57 530 aa3.58□□□□□ -1.84
SSB-209ENST00000470621 TRUB1Q8WWH5 349 aaKnown RBP3.58□□□□□ -1.84
SSB-209ENST00000470621 SPXQ9BT56 116 aa3.58□□□□□ -1.84
SSB-209ENST00000470621 POLR3FQ9H1D9 316 aaPredicted RBP3.58□□□□□ -1.84
SSB-209ENST00000470621 OR51J1Q9H342 316 aa3.58□□□□□ -1.84
SSB-209ENST00000470621 CAB39LQ9H9S4 337 aa3.58□□□□□ -1.84
SSB-209ENST00000470621 RBM28Q9NW13 759 aaKnown RBP3.58□□□□□ -1.84
SSB-209ENST00000470621 FOXJ3Q9UPW0 622 aa3.58□□□□□ -1.84
SSB-209ENST00000470621 NEU3Q9UQ49 428 aa3.58□□□□□ -1.84
SSB-209ENST00000470621 WASHC1A8K0Z3 465 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 WASH3PC4AMC7 463 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 TRIM3O75382 744 aaPredicted RBP3.57□□□□□ -1.84
SSB-209ENST00000470621 LYPLA1O75608 230 aaPredicted RBP3.57□□□□□ -1.84
SSB-209ENST00000470621 CABYRO75952 493 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 BAG2O95816 211 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 SEMG1P04279 462 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 OR8U8P0C7N1 319 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 IGLL1P15814 213 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 FUT1P19526 365 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 CYLC1P35663 651 aaPredicted RBP3.57□□□□□ -1.84
SSB-209ENST00000470621 RPL29P47914 159 aaKnown RBP3.57□□□□□ -1.84
SSB-209ENST00000470621 HLCSP50747 726 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 MRPS11P82912 194 aaKnown RBP3.57□□□□□ -1.84
SSB-209ENST00000470621 ZNF45Q02386 682 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 OC90Q02509 493 aaPredicted RBP3.57□□□□□ -1.84
SSB-209ENST00000470621 ST3GAL3Q11203 375 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 CHI3L2Q15782 390 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 WASH2PQ6VEQ5 465 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
SSB-209ENST00000470621 FAM71CQ8NEG0 241 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 OR2A12Q8NGT7 310 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 PARD3Q8TEW0 1356 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 ZNF799Q96GE5 643 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 NFKBIZQ9BYH8 718 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 RSPH9Q9H1X1 276 aaPredicted RBP3.57□□□□□ -1.84
SSB-209ENST00000470621 PAK1IP1Q9NWT1 392 aaPredicted RBP3.57□□□□□ -1.84
SSB-209ENST00000470621 NINJ2Q9NZG7 142 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 XPO7Q9UIA9 1087 aaKnown RBP3.57□□□□□ -1.84
SSB-209ENST00000470621 SAMD4AQ9UPU9 718 aaKnown RBP3.57□□□□□ -1.84
SSB-209ENST00000470621 EIF3LQ9Y262 564 aaKnown RBP3.57□□□□□ -1.84
SSB-209ENST00000470621 GMPPBQ9Y5P6 360 aa3.57□□□□□ -1.84
SSB-209ENST00000470621 RLFQ13129 1914 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 ARHGAP23Q9P227 1491 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 TUBAL3A6NHL2 446 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 FAM74A7A6NL05 159 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 STX11O75558 287 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 PTBP3O95758 552 aaKnown RBP3.56□□□□□ -1.84
SSB-209ENST00000470621 PRB2P02812 416 aaPredicted RBP3.56□□□□□ -1.84
SSB-209ENST00000470621 CA3P07451 260 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 GNPDA1P46926 289 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 ATXN3P54252 364 aaPredicted RBP3.56□□□□□ -1.84
SSB-209ENST00000470621 SPP2Q13103 211 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 ELAVL3Q14576 367 aaKnown RBP3.56□□□□□ -1.84
SSB-209ENST00000470621 ADPRMQ3LIE5 342 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 FAM74A3Q4VXF1 159 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 ERASQ7Z444 233 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 ZNF589Q86UQ0 364 aaPredicted RBP3.56□□□□□ -1.84
SSB-209ENST00000470621 C17orf82Q86X59 251 aaPredicted RBP3.56□□□□□ -1.84
SSB-209ENST00000470621 LINC01561Q8N1V8 128 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 STKLD1Q8NE28 680 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 ANKRD20A12PQ8NF67 263 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 RNF138Q8WVD3 245 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 NEIL2Q969S2 332 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 ELSPBP1Q96BH3 223 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 COG4Q9H9E3 785 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 DBNDD1Q9H9R9 158 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 RIMS3Q9UJD0 308 aa3.56□□□□□ -1.84
SSB-209ENST00000470621 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.56□□□□□ -1.84
SSB-209ENST00000470621 C19orf81C9J6K1 198 aa3.55□□□□□ -1.84
SSB-209ENST00000470621 SSX5O60225 188 aa3.55□□□□□ -1.84
SSB-209ENST00000470621 TBL1XO60907 577 aa3.55□□□□□ -1.84
SSB-209ENST00000470621 BCKDHAP12694 445 aa3.55□□□□□ -1.84
SSB-209ENST00000470621 MDKP21741 143 aaPredicted RBP3.55□□□□□ -1.84
SSB-209ENST00000470621 DHPSP49366 369 aaPredicted RBP3.55□□□□□ -1.84
SSB-209ENST00000470621 CEBPEQ15744 281 aa3.55□□□□□ -1.84
SSB-209ENST00000470621 AANATQ16613 207 aa3.55□□□□□ -1.84
SSB-209ENST00000470621 METTL11BQ5VVY1 283 aa3.55□□□□□ -1.84
SSB-209ENST00000470621 OR8G2PQ6IF36 304 aa3.55□□□□□ -1.84
SSB-209ENST00000470621 IRGCQ6NXR0 463 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms