RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 TCP11Q8WWU5 503 aa2.56□□□□□ -2
XRN1-206ENST00000467077 CRYGNQ8WXF5 182 aa2.56□□□□□ -2
XRN1-206ENST00000467077 PTP4A1Q93096 173 aa2.56□□□□□ -2
XRN1-206ENST00000467077 SNRNP40Q96DI7 357 aaKnown RBP2.56□□□□□ -2
XRN1-206ENST00000467077 CCDC51Q96ER9 411 aa2.56□□□□□ -2
XRN1-206ENST00000467077 CEP170P1Q96L14 293 aa2.56□□□□□ -2
XRN1-206ENST00000467077 GLT8D2Q9H1C3 349 aa2.56□□□□□ -2
XRN1-206ENST00000467077 MARCH7Q9H992 704 aa2.56□□□□□ -2
XRN1-206ENST00000467077 WDR41Q9HAD4 459 aa2.56□□□□□ -2
XRN1-206ENST00000467077 DEPPQ9NTK1 212 aa2.56□□□□□ -2
XRN1-206ENST00000467077 PDRG1Q9NUG6 133 aa2.56□□□□□ -2
XRN1-206ENST00000467077 CLEC5AQ9NY25 188 aa2.56□□□□□ -2
XRN1-206ENST00000467077 MTRRQ9UBK8 725 aa2.56□□□□□ -2
XRN1-206ENST00000467077 MGAQ8IWI9 3026 aa2.56□□□□□ -2
XRN1-206ENST00000467077 ANAPC1Q9H1A4 1944 aa2.56□□□□□ -2
XRN1-206ENST00000467077 PCDH15Q96QU1 1955 aa2.56□□□□□ -2
XRN1-206ENST00000467077 ANKDD1BA6NHY2 528 aa2.55□□□□□ -2
XRN1-206ENST00000467077 ZNF732B4DXR9 585 aa2.55□□□□□ -2
XRN1-206ENST00000467077 E9PAM4 449 aa2.55□□□□□ -2
XRN1-206ENST00000467077 H0YIG0 161 aa2.55□□□□□ -2
XRN1-206ENST00000467077 J3QKU1 62 aa2.55□□□□□ -2
XRN1-206ENST00000467077 TRAPPC3O43617 180 aa2.55□□□□□ -2
XRN1-206ENST00000467077 SCO2O43819 266 aa2.55□□□□□ -2
XRN1-206ENST00000467077 CRCPO75575 148 aa2.55□□□□□ -2
XRN1-206ENST00000467077 RAD51DO75771 328 aa2.55□□□□□ -2
XRN1-206ENST00000467077 GLCEO94923 617 aa2.55□□□□□ -2
XRN1-206ENST00000467077 STBD1O95210 358 aa2.55□□□□□ -2
XRN1-206ENST00000467077 APBB3O95704 486 aa2.55□□□□□ -2
XRN1-206ENST00000467077 IGHG1P01857 330 aa2.55□□□□□ -2
XRN1-206ENST00000467077 MT-ND1P03886 318 aa2.55□□□□□ -2
XRN1-206ENST00000467077 FAM200BP0CF97 657 aa2.55□□□□□ -2
XRN1-206ENST00000467077 C8orf89P0DMQ9 161 aa2.55□□□□□ -2
XRN1-206ENST00000467077 KRT3P12035 628 aa2.55□□□□□ -2
XRN1-206ENST00000467077 BCKDHBP21953 392 aa2.55□□□□□ -2
XRN1-206ENST00000467077 U2AF2P26368 475 aaKnown RBP eCLIP2.55□□□□□ -2
XRN1-206ENST00000467077 ELK3P41970 407 aa2.55□□□□□ -2
XRN1-206ENST00000467077 MAGEB1P43366 347 aa2.55□□□□□ -2
XRN1-206ENST00000467077 IER3P46695 156 aa2.55□□□□□ -2
XRN1-206ENST00000467077 BRCC3P46736 316 aa2.55□□□□□ -2
XRN1-206ENST00000467077 QARSP47897 775 aaKnown RBP2.55□□□□□ -2
XRN1-206ENST00000467077 STX1BP61266 288 aa2.55□□□□□ -2
XRN1-206ENST00000467077 PSMC5P62195 406 aa2.55□□□□□ -2
XRN1-206ENST00000467077 AKAP17AQ02040 695 aaKnown RBP2.55□□□□□ -2
XRN1-206ENST00000467077 TWF1Q12792 350 aa2.55□□□□□ -2
XRN1-206ENST00000467077 CNTN1Q12860 1018 aa2.55□□□□□ -2
XRN1-206ENST00000467077 TFDP1Q14186 410 aa2.55□□□□□ -2
XRN1-206ENST00000467077 RCN2Q14257 317 aa2.55□□□□□ -2
XRN1-206ENST00000467077 DMC1Q14565 340 aa2.55□□□□□ -2
XRN1-206ENST00000467077 MXD4Q14582 209 aaPredicted RBP2.55□□□□□ -2
XRN1-206ENST00000467077 EMC2Q15006 297 aa2.55□□□□□ -2
XRN1-206ENST00000467077 MAPK11Q15759 364 aa2.55□□□□□ -2
XRN1-206ENST00000467077 MAPK6Q16659 721 aa2.55□□□□□ -2
XRN1-206ENST00000467077 ZNF674Q2M3X9 581 aa2.55□□□□□ -2
XRN1-206ENST00000467077 TMEM44Q2T9K0 475 aa2.55□□□□□ -2
XRN1-206ENST00000467077 POM121L1PQ3SYA9 428 aa2.55□□□□□ -2
XRN1-206ENST00000467077 ZNF789Q5FWF6 425 aa2.55□□□□□ -2
XRN1-206ENST00000467077 MUC21Q5SSG8 566 aa2.55□□□□□ -2
XRN1-206ENST00000467077 TEX35Q5T0J7 233 aa2.55□□□□□ -2
XRN1-206ENST00000467077 KCTD9Q7L273 389 aa2.55□□□□□ -2
XRN1-206ENST00000467077 LPCAT2Q7L5N7 544 aa2.55□□□□□ -2
XRN1-206ENST00000467077 OTUD6AQ7L8S5 288 aa2.55□□□□□ -2
XRN1-206ENST00000467077 CCDC91Q7Z6B0 441 aa2.55□□□□□ -2
XRN1-206ENST00000467077 SIAH3Q8IW03 269 aa2.55□□□□□ -2
XRN1-206ENST00000467077 CCDC83Q8IWF9 413 aa2.55□□□□□ -2
XRN1-206ENST00000467077 ASCC3Q8N3C0 2202 aaKnown RBP2.55□□□□□ -2
XRN1-206ENST00000467077 LEMD2Q8NC56 503 aa2.55□□□□□ -2
XRN1-206ENST00000467077 BOD1L1Q8NFC6 3051 aa2.55□□□□□ -2
XRN1-206ENST00000467077 EXOC6Q8TAG9 804 aa2.55□□□□□ -2
XRN1-206ENST00000467077 ITLN1Q8WWA0 313 aa2.55□□□□□ -2
XRN1-206ENST00000467077 ALKBH3Q96Q83 286 aaPredicted RBP2.55□□□□□ -2
XRN1-206ENST00000467077 RASL10BQ96S79 203 aa2.55□□□□□ -2
XRN1-206ENST00000467077 RIT2Q99578 217 aa2.55□□□□□ -2
XRN1-206ENST00000467077 P2RY13Q9BPV8 354 aa2.55□□□□□ -2
XRN1-206ENST00000467077 C17orf62Q9BQA9 187 aa2.55□□□□□ -2
XRN1-206ENST00000467077 ZNF559Q9BR84 538 aa2.55□□□□□ -2
XRN1-206ENST00000467077 PINK1Q9BXM7 581 aa2.55□□□□□ -2
XRN1-206ENST00000467077 CACNG6Q9BXT2 260 aa2.55□□□□□ -2
XRN1-206ENST00000467077 LRRC2Q9BYS8 371 aa2.55□□□□□ -2
XRN1-206ENST00000467077 CXCL16Q9H2A7 254 aa2.55□□□□□ -2
XRN1-206ENST00000467077 CUEDC2Q9H467 287 aa2.55□□□□□ -2
XRN1-206ENST00000467077 DHX33Q9H6R0 707 aaKnown RBP2.55□□□□□ -2
XRN1-206ENST00000467077 C6orf50Q9HD87 102 aa2.55□□□□□ -2
XRN1-206ENST00000467077 RBM28Q9NW13 759 aaKnown RBP2.55□□□□□ -2
XRN1-206ENST00000467077 THYN1Q9P016 225 aa2.55□□□□□ -2
XRN1-206ENST00000467077 UBQLN2Q9UHD9 624 aa2.55□□□□□ -2
XRN1-206ENST00000467077 NAP1L2Q9ULW6 460 aaPredicted RBP2.55□□□□□ -2
XRN1-206ENST00000467077 SPATA2Q9UM82 520 aa2.55□□□□□ -2
XRN1-206ENST00000467077 RELNP78509 3460 aa2.55□□□□□ -2
XRN1-206ENST00000467077 SDK1Q7Z5N4 2213 aa2.54□□□□□ -2
XRN1-206ENST00000467077 CEP295Q9C0D2 2601 aa2.54□□□□□ -2
XRN1-206ENST00000467077 TRBV5-4A0A0C4DH59 114 aa2.54□□□□□ -2
XRN1-206ENST00000467077 A0A1B0GUA9 196 aa2.54□□□□□ -2
XRN1-206ENST00000467077 A0A1W2PQ72 361 aa2.54□□□□□ -2
XRN1-206ENST00000467077 LRRD1A4D1F6 860 aa2.54□□□□□ -2
XRN1-206ENST00000467077 TRABD2BA6NFA1 517 aa2.54□□□□□ -2
XRN1-206ENST00000467077 LRRIQ4A6NIV6 560 aa2.54□□□□□ -2
XRN1-206ENST00000467077 TRDMT1O14717 391 aaKnown RBP2.54□□□□□ -2
XRN1-206ENST00000467077 TTI1O43156 1089 aa2.54□□□□□ -2
XRN1-206ENST00000467077 OR6B1O95007 311 aa2.54□□□□□ -2
XRN1-206ENST00000467077 GOSR1O95249 250 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms