RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 JKAMPQ9P055 326 aa19.67■□□□□ 0.74
LIME1-203ENST00000465591 RCBTB2O95199 551 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 IL18BPO95998 194 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 NGFRP08138 427 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 POU3F2P20265 443 aaPredicted RBP19.66■□□□□ 0.74
LIME1-203ENST00000465591 HBA1P69905 142 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 POU6F2P78424 691 aaPredicted RBP19.66■□□□□ 0.74
LIME1-203ENST00000465591 MAD2L1Q13257 205 aaPredicted RBP19.66■□□□□ 0.74
LIME1-203ENST00000465591 STX3Q13277 289 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 TP53BP2Q13625 1128 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 TMEM44Q2T9K0 475 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 SMU1Q2TAY7 513 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 CDC73Q6P1J9 531 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 CAMKMTQ7Z624 323 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 CROCCP2Q86T23 111 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 ZZZ3Q8IYH5 903 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 CLECL1Q8IZS7 167 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 OR5AK3PQ8NH89 298 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 STACQ99469 402 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 PAIP2Q9BPZ3 127 aaKnown RBP19.66■□□□□ 0.74
LIME1-203ENST00000465591 BTBD2Q9BX70 525 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 NUF2Q9BZD4 464 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 PIGUQ9H490 435 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 PTGES2Q9H7Z7 377 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 DUSP22Q9NRW4 184 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 ARGLU1Q9NWB6 273 aaPredicted RBP19.66■□□□□ 0.74
LIME1-203ENST00000465591 CRIM1Q9NZV1 1036 aa19.66■□□□□ 0.74
LIME1-203ENST00000465591 F8P00451 2351 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 EEF1E1-BLOC1S5C9J1V9 151 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 EEF1E1O43324 174 aaKnown RBP19.65■□□□□ 0.74
LIME1-203ENST00000465591 NDUFB5O43674 189 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 PEPDP12955 493 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 OPRM1P35372 400 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 CLDN20P56880 219 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 CD226Q15762 336 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 PGS1Q32NB8 556 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 OR4F3Q6IEY1 312 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 CLEC4FQ8N1N0 589 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 OR56A1Q8NGH5 318 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 CHMP6Q96FZ7 201 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 PRPF18Q99633 342 aaKnown RBP19.65■□□□□ 0.74
LIME1-203ENST00000465591 TM9SF2Q99805 663 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 ACTRT3Q9BYD9 372 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 SERHL2Q9H4I8 314 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 VDAC3Q9Y277 283 aa19.65■□□□□ 0.74
LIME1-203ENST00000465591 HEATR5AQ86XA9 2040 aa19.64■□□□□ 0.74
LIME1-203ENST00000465591 HRNRQ86YZ3 2850 aaPredicted RBP19.64■□□□□ 0.73
LIME1-203ENST00000465591 NPIPA5A0A0B4J1W7 369 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 TMEM120BA0PK00 339 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 NPIPA7E9PJI5 369 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 H3BML4 177 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 ANKRD28O15084 1053 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 SEC14L5O43304 696 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 NPIPA8P0DM63 369 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 CAPN3P20807 821 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 KIR2DL3P43628 341 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 RNF144AP50876 292 aaPredicted RBP19.64■□□□□ 0.73
LIME1-203ENST00000465591 PHC1P78364 1004 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 LSM12Q3MHD2 195 aaKnown RBP19.64■□□□□ 0.73
LIME1-203ENST00000465591 SPDYE7PQ495Y7 208 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 BEND6Q5SZJ8 279 aaPredicted RBP19.64■□□□□ 0.73
LIME1-203ENST00000465591 GRAMD2AQ8IUY3 354 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 NATD1Q8N6N6 113 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 SFXN5Q8TD22 340 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 FIG4Q92562 907 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 UBQLN4Q9NRR5 601 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 GIN1Q9NXP7 522 aa19.64■□□□□ 0.73
LIME1-203ENST00000465591 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 CFLARO15519 480 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 TNFSF13O75888 250 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 RPS26P62854 115 aaKnown RBP19.63■□□□□ 0.73
LIME1-203ENST00000465591 GLYR1Q49A26 553 aaPredicted RBP19.63■□□□□ 0.73
LIME1-203ENST00000465591 HHATQ5VTY9 493 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 CDH24Q86UP0 819 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 TMEM200AQ86VY9 491 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 OR5D16Q8NGK9 328 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 MGARPQ8TDB4 240 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 SMPDL3BQ92485 455 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 NRGNQ92686 78 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 SH3YL1Q96HL8 342 aaPredicted RBP19.63■□□□□ 0.73
LIME1-203ENST00000465591 ZNF845Q96IR2 970 aaPredicted RBP19.63■□□□□ 0.73
LIME1-203ENST00000465591 ZFP3Q96NJ6 502 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 PIGQQ9BRB3 760 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 SFXN3Q9BWM7 321 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 MEAF6Q9HAF1 191 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 NEUROD4Q9HD90 331 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 ITGB1BP2Q9UKP3 347 aa19.63■□□□□ 0.73
LIME1-203ENST00000465591 OIP5O43482 229 aa19.62■□□□□ 0.73
LIME1-203ENST00000465591 SCN2BO60939 215 aa19.62■□□□□ 0.73
LIME1-203ENST00000465591 SNUPNO95149 360 aaKnown RBP19.62■□□□□ 0.73
LIME1-203ENST00000465591 LCN1P31025 176 aa19.62■□□□□ 0.73
LIME1-203ENST00000465591 SOAT1P35610 550 aa19.62■□□□□ 0.73
LIME1-203ENST00000465591 DCST2Q5T1A1 773 aa19.62■□□□□ 0.73
LIME1-203ENST00000465591 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.62■□□□□ 0.73
LIME1-203ENST00000465591 LUZP2Q86TE4 346 aa19.62■□□□□ 0.73
LIME1-203ENST00000465591 GGNQ86UU5 652 aa19.62■□□□□ 0.73
LIME1-203ENST00000465591 MEIOBQ8N635 442 aa19.62■□□□□ 0.73
LIME1-203ENST00000465591 ADAMTS15Q8TE58 950 aa19.62■□□□□ 0.73
LIME1-203ENST00000465591 OR7D2Q96RA2 312 aa19.62■□□□□ 0.73
LIME1-203ENST00000465591 SLC24A3Q9HC58 644 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms