RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 SNTA1Q13424 505 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 BICRALQ6AI39 1079 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 TMEM81Q6P7N7 255 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 TRILQ7L0X0 811 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 OR5D16Q8NGK9 328 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 FAM110BQ8TC76 370 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 MIPOL1Q8TD10 442 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 OR51I1Q9H343 314 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 PROK2Q9HC23 129 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 SAR1AQ9NR31 198 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 PNPLA3Q9NST1 481 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 EXD2Q9NVH0 621 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 FAM53CQ9NYF3 392 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 ITGB1BP2Q9UKP3 347 aa16.16■□□□□ 0.18
COL7A1-205ENST00000465238 A0A096LPI6 279 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 NKX2-6A6NCS4 301 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 FAM90A27PA6NNH2 459 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 AQP7O14520 342 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 SUSD5O60279 629 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 ICOSLGO75144 302 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 TOXO94900 526 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 IGKV1D-16P01601 117 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 ATP6V1C1P21283 382 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 KHKP50053 298 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 TFF3Q07654 80 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 ATAD3BQ5T9A4 648 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 TNFAIP8L2Q6P589 184 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-205ENST00000465238 CDH24Q86UP0 819 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 RNF130Q86XS8 419 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 CCDC71Q8IV32 467 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-205ENST00000465238 OR5M9Q8NGP3 310 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 TSPEARQ8WU66 669 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 ZNF597Q96LX8 424 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 OSBPL11Q9BXB4 747 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 UCK2Q9BZX2 261 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 SERHL2Q9H4I8 314 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 ZFP64Q9NPA5 681 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 SLC52A3Q9NQ40 469 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 NPDC1Q9NQX5 325 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-205ENST00000465238 LEF1Q9UJU2 399 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-205ENST00000465238 NDUFAF1Q9Y375 327 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 LIPGQ9Y5X9 500 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 KCNE3Q9Y6H6 103 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 C2CD3Q4AC94 2353 aa16.15■□□□□ 0.18
COL7A1-205ENST00000465238 ANGPT2O15123 496 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 CCDC22O60826 627 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 TRIM3O75382 744 aaPredicted RBP16.14■□□□□ 0.17
COL7A1-205ENST00000465238 UTS2O95399 124 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 OR12D1P0DN82 309 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 MSX1P28360 303 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 LCN1P31025 176 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 TXNL4AP83876 142 aaKnown RBP16.14■□□□□ 0.17
COL7A1-205ENST00000465238 KLF10Q13118 480 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 SLC10A1Q14973 349 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL7A1-205ENST00000465238 DCST2Q5T1A1 773 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 CCNJQ5T5M9 372 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 ZNF585AQ6P3V2 769 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 B3GNT6Q6ZMB0 384 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 C16orf62Q7Z3J2 963 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 GALNT10Q86SR1 603 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 ZFP90Q8TF47 636 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 XAGE5Q8WWM1 108 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 SARAFQ96BY9 339 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 TMEM41AQ96HV5 264 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 PAIP1Q9H074 479 aaKnown RBP16.14■□□□□ 0.17
COL7A1-205ENST00000465238 LDAHQ9H6V9 325 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 TPT1P8Q9HAU6 139 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 SDHAF3Q9NRP4 125 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 SLC6A13Q9NSD5 602 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 B4GALT7Q9UBV7 327 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 ABCG2Q9UNQ0 655 aa16.14■□□□□ 0.17
COL7A1-205ENST00000465238 C2orf72A6NCS6 295 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 SNX3O60493 162 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 HCN1O60741 890 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 WDR1O75083 606 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 AK1P00568 194 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 CD1EP15812 388 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 ADSLP30566 484 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-205ENST00000465238 EVI2BP34910 448 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 MAGEA8P43361 318 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 MAPRE2Q15555 327 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 GTDC1Q4AE62 458 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 PAGE3Q5JUK9 113 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 DMRTC2Q8IXT2 367 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-205ENST00000465238 OR10Q1Q8NGQ4 319 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 OR1J4Q8NGS1 313 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 PNPT1Q8TCS8 783 aaKnown RBP16.13■□□□□ 0.17
COL7A1-205ENST00000465238 RAB8BQ92930 207 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 TTYH2Q9BSA4 534 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 TBL1XR1Q9BZK7 514 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 SLC24A3Q9HC58 644 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 GALNT9Q9HCQ5 603 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 FBXO34Q9NWN3 711 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 ACAD8Q9UKU7 415 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 PCDHB14Q9Y5E9 798 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 CAPN7Q9Y6W3 813 aa16.13■□□□□ 0.17
COL7A1-205ENST00000465238 GNB5O14775 395 aa16.12■□□□□ 0.17
COL7A1-205ENST00000465238 SCO2O43819 266 aa16.12■□□□□ 0.17
COL7A1-205ENST00000465238 FADS1O60427 444 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms