RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 NUDT15Q9NV35 164 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 PAK5Q9P286 719 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 NPIPA1Q9UND3 350 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 RPH3ALQ9UNE2 315 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 SAMD4AQ9UPU9 718 aaKnown RBP2.38□□□□□ -2.03
HDAC6-212ENST00000461608 SMC3Q9UQE7 1217 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 GSTK1Q9Y2Q3 226 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 CSAG2Q9Y5P2 127 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 STYXL1Q9Y6J8 313 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 IKBKGQ9Y6K9 419 aa2.38□□□□□ -2.03
HDAC6-212ENST00000461608 COL5A2P05997 1499 aaPredicted RBP2.38□□□□□ -2.03
HDAC6-212ENST00000461608 CLRN2A0PK11 232 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 ZSCAN5CA6NGD5 496 aaPredicted RBP2.37□□□□□ -2.03
HDAC6-212ENST00000461608 OR6C65A6NJZ3 312 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 EFCAB7A8K855 629 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 FAM220BPB1ANY3 271 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 G3V3Y1 287 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 N4BP1O75113 896 aaKnown RBP2.37□□□□□ -2.03
HDAC6-212ENST00000461608 UGT2B4P06133 528 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 FOLR2P14207 255 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 NT5EP21589 574 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 GLRA2P23416 452 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 NMT1P30419 496 aaKnown RBP2.37□□□□□ -2.03
HDAC6-212ENST00000461608 CA8P35219 290 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 NF2P35240 595 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 SSR1P43307 286 aaKnown RBP2.37□□□□□ -2.03
HDAC6-212ENST00000461608 MAGEA9P43362 315 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 POU3F4P49335 361 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 AP3M2P53677 418 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 IL18R1Q13478 541 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 GPM6BQ13491 265 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 GANABQ14697 944 aaKnown RBP2.37□□□□□ -2.03
HDAC6-212ENST00000461608 MAPK6Q16659 721 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 USH1GQ495M9 461 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 TTC23Q5W5X9 447 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 TMEM225Q6GV28 225 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 Q6ZPB1 254 aaPredicted RBP2.37□□□□□ -2.03
HDAC6-212ENST00000461608 APTXQ7Z2E3 356 aaKnown RBP2.37□□□□□ -2.03
HDAC6-212ENST00000461608 TMEM110Q86TL2 294 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 LCA5Q86VQ0 697 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 MARCH9Q86YJ5 346 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 HIPK1Q86Z02 1210 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 CADM2Q8N3J6 435 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 OR52M1Q8NGK5 317 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 OR6T1Q8NGN1 323 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 AENQ8WTP8 325 aaKnown RBP2.37□□□□□ -2.03
HDAC6-212ENST00000461608 OSTF1Q92882 214 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 RAB3CQ96E17 227 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 PPP1R16AQ96I34 528 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 OR5M11Q96RB7 305 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 ATOH8Q96SQ7 321 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 RIT2Q99578 217 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 ERP44Q9BS26 406 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 TMEM117Q9H0C3 514 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 PPDPFQ9H3Y8 114 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 CALHM2Q9HA72 323 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 COX16Q9P0S2 106 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 PIPOXQ9P0Z9 390 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 MMP24Q9Y5R2 645 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 PCNX3Q9H6A9 2034 aa2.37□□□□□ -2.03
HDAC6-212ENST00000461608 TRAV9-2A0A087WT02 112 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 PCP4L1A6NKN8 68 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 ERI2A8K979 691 aaKnown RBP2.36□□□□□ -2.03
HDAC6-212ENST00000461608 BTN3A3O00478 584 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 STX7O15400 261 aaKnown RBP2.36□□□□□ -2.03
HDAC6-212ENST00000461608 MSH4O15457 936 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 GPRIN2O60269 458 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF253O75346 499 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 UGT2B17O75795 530 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 CABYRO75952 493 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 OPN1MWP04001 364 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 IQCF3P0C7M6 154 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 OPN1MW2P0DN77 364 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 OPN1MW3P0DN78 364 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 GATA1P15976 413 aaPredicted RBP2.36□□□□□ -2.03
HDAC6-212ENST00000461608 ACADSP16219 412 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 TPSB2P20231 275 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 IGHV1-2P23083 117 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 RGS4P49798 205 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 PLA2G16P53816 162 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 RPL8P62917 257 aaKnown RBP2.36□□□□□ -2.03
HDAC6-212ENST00000461608 ZFP36L1Q07352 338 aaKnown RBP2.36□□□□□ -2.03
HDAC6-212ENST00000461608 CD47Q08722 323 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 RAB40BQ12829 278 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 COX10Q12887 443 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 PEX6Q13608 980 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 RUNX3Q13761 415 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 TPSAB1Q15661 275 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 CHI3L2Q15782 390 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 QRICH1Q2TAL8 776 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 C15orf32Q32M92 178 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 ACSM5Q6NUN0 579 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 FAM71F2Q6NXP2 309 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 CASC1Q6TDU7 716 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 CES3Q6UWW8 571 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 CCBE1Q6UXH8 406 aaPredicted RBP2.36□□□□□ -2.03
HDAC6-212ENST00000461608 LANCL3Q6ZV70 420 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 MOB3BQ86TA1 216 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 SERPINA9Q86WD7 417 aa2.36□□□□□ -2.03
HDAC6-212ENST00000461608 GRAMD2AQ8IUY3 354 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms