RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 OR4F17Q8NGA8 305 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 OR9K2Q8NGE7 335 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 OR4F5Q8NH21 305 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 SLC2A14Q8TDB8 520 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 STARD8Q92502 1023 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 LHX4Q969G2 390 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 ADIPOR1Q96A54 375 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 COQ2Q96H96 371 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 ELMO2Q96JJ3 720 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 OR4F4Q96R69 305 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 BCL7BQ9BQE9 202 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 MTG1Q9BT17 334 aaPredicted RBP2.51□□□□□ -2.01
HPS3-203ENST00000460822 NUP58Q9BVL2 599 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 TRIM9Q9C026 710 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 MMP28Q9H239 520 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 CLSTN2Q9H4D0 955 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 EXO5Q9H790 373 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 MTHFD2LQ9H903 347 aaPredicted RBP2.51□□□□□ -2.01
HPS3-203ENST00000460822 FANCEQ9HB96 536 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 SGK2Q9HBY8 427 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 UFSP2Q9NUQ7 469 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 NLGN3Q9NZ94 848 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 SPATA7Q9P0W8 599 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 PIPOXQ9P0Z9 390 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 CDH9Q9ULB4 789 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 PPP1R3CQ9UQK1 317 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 CSNK1G3Q9Y6M4 447 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 CRYBG1Q9Y4K1 1723 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 ATP7AQ04656 1500 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 CD163L1Q9NR16 1453 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 A0A0A6YYD4 124 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 FBLL1A6NHQ2 334 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 PCP4L1A6NKN8 68 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 C15orf61A6NNL5 157 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 PMS2P5A8MQ11 134 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 BLOC1S5-TXNDC5H3BN57 136 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 INPP4BO15327 924 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 TNFSF12O43508 249 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 LMX1BO60663 402 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 WBP4O75554 376 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 CEACAM4O75871 244 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 PABPC4LP0CB38 370 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 DBTP11182 482 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 TPSB2P20231 275 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 OPRL1P41146 370 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 OR1G1P47890 313 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 SEC61GP60059 68 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 ERVFC1-1P60608 527 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 RPS8P62241 208 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 TPSAB1Q15661 275 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 PCK2Q16822 640 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 ZNF672Q499Z4 452 aaPredicted RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 PRAMEF5Q5TYX0 476 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 PRAMEF6Q5VXH4 476 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 RHBDD2Q6NTF9 364 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 PNCKQ6P2M8 343 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 KDM7AQ6ZMT4 941 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 OTUD6AQ7L8S5 288 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 TRPM8Q7Z2W7 1104 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 KIAA1328Q86T90 577 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 PARGQ86W56 976 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 ECHDC2Q86YB7 292 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 TMEM123Q8N131 208 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 KRT222Q8N1A0 295 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 SYT14Q8NB59 555 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 C17orf47Q8NEP4 570 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 OR1K1Q8NGR3 316 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 NANPQ8TBE9 248 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 PIGCQ92535 297 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 PEX13Q92968 403 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 UPRTQ96BW1 309 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 CNRIP1Q96F85 164 aaPredicted RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 CPXM1Q96SM3 734 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 ROPN1BQ9BZX4 212 aaPredicted RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 ZNF556Q9HAH1 456 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 NMUR1Q9HB89 426 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 IL1RAPQ9NPH3 570 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 SPHK2Q9NRA0 654 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 C2orf42Q9NWW7 574 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 UTP6Q9NYH9 597 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 GHRLQ9UBU3 117 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 SUN2Q9UH99 717 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 PURGQ9UJV8 347 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 EMCNQ9ULC0 261 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 PIGLQ9Y2B2 252 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 SLC9A8Q9Y2E8 581 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 IFT52Q9Y366 437 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 MRPS18CQ9Y3D5 142 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 SMCHD1A6NHR9 2005 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 A0A1W2PP64 1363 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 PIK3C2BO00750 1634 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 MSH6P52701 1360 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 PNPLA6Q8IY17 1366 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 FAM208AQ9UK61 1670 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 ZFYVE9O95405 1425 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 SSH2Q76I76 1423 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 CHD1O14646 1710 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 XRN1Q8IZH2 1706 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 SIGLEC1Q9BZZ2 1709 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 CDK12Q9NYV4 1490 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms