RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 FBXO34Q9NWN3 711 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 NOP53Q9NZM5 478 aaKnown RBP17.09■□□□□ 0.33
COL5A1-203ENST00000460264 ZNF337Q9Y3M9 751 aa17.09■□□□□ 0.33
COL5A1-203ENST00000460264 MPDZO75970 2070 aa17.08■□□□□ 0.33
COL5A1-203ENST00000460264 LINC01387J3KSC0 135 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 NDUFB5O43674 189 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 GMFGO60234 142 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 SNUPNO95149 360 aaKnown RBP17.08■□□□□ 0.32
COL5A1-203ENST00000460264 TGM6O95932 706 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 MYZAPP0CAP1 466 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 SLC1A6P48664 564 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 CCT3P49368 545 aaKnown RBP17.08■□□□□ 0.32
COL5A1-203ENST00000460264 CLDN15P56746 228 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 CLDN8P56748 225 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 POU6F2P78424 691 aaPredicted RBP17.08■□□□□ 0.32
COL5A1-203ENST00000460264 TP53BP2Q13625 1128 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 TMEM44Q2T9K0 475 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 LSM12Q3MHD2 195 aaKnown RBP17.08■□□□□ 0.32
COL5A1-203ENST00000460264 GLYR1Q49A26 553 aaPredicted RBP17.08■□□□□ 0.32
COL5A1-203ENST00000460264 FLYWCH1Q4VC44 716 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 CDC73Q6P1J9 531 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 CAMKMTQ7Z624 323 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 CROCCP2Q86T23 111 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 MEIOBQ8N635 442 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 GATSQ8NAP1 163 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 OR56A1Q8NGH5 318 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 SFXN5Q8TD22 340 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 CDS1Q92903 461 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 PIGQQ9BRB3 760 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 DUSP26Q9BV47 211 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 BTBD2Q9BX70 525 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 AKTIPQ9H8T0 292 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 HHATLQ9HCP6 504 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 NEUROD4Q9HD90 331 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 KCNK9Q9NPC2 374 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 HAO1Q9UJM8 370 aa17.08■□□□□ 0.32
COL5A1-203ENST00000460264 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.08■□□□□ 0.32
COL5A1-203ENST00000460264 F8P00451 2351 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 SLC22A20A6NK97 555 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 H0YC42 278 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 H3BML4 177 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 CTAG2O75638 210 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 BGNP21810 368 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 RPL14P50914 215 aaKnown RBP17.07■□□□□ 0.32
COL5A1-203ENST00000460264 SUCLG1P53597 346 aaKnown RBP17.07■□□□□ 0.32
COL5A1-203ENST00000460264 TPD52P55327 224 aaPredicted RBP17.07■□□□□ 0.32
COL5A1-203ENST00000460264 SPDYE7PQ495Y7 208 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 KIF18BQ86Y91 864 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 FAM222BQ8WU58 562 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 CHMP6Q96FZ7 201 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 ACTRT3Q9BYD9 372 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 PIGUQ9H490 435 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 UBQLN4Q9NRR5 601 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 GPATCH2Q9NW75 528 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 GIN1Q9NXP7 522 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 ITGB1BP2Q9UKP3 347 aa17.07■□□□□ 0.32
COL5A1-203ENST00000460264 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.06■□□□□ 0.32
COL5A1-203ENST00000460264 SHISA8B8ZZ34 492 aa17.06■□□□□ 0.32
COL5A1-203ENST00000460264 SEC14L5O43304 696 aa17.06■□□□□ 0.32
COL5A1-203ENST00000460264 TNFSF13O75888 250 aa17.06■□□□□ 0.32
COL5A1-203ENST00000460264 KRT16P08779 473 aa17.06■□□□□ 0.32
COL5A1-203ENST00000460264 ZNF17P17021 662 aa17.06■□□□□ 0.32
COL5A1-203ENST00000460264 CLDN20P56880 219 aa17.06■□□□□ 0.32
COL5A1-203ENST00000460264 EEFSECP57772 596 aaKnown RBP17.06■□□□□ 0.32
COL5A1-203ENST00000460264 HBA1P69905 142 aa17.06■□□□□ 0.32
COL5A1-203ENST00000460264 SORDQ00796 357 aa17.06■□□□□ 0.32
COL5A1-203ENST00000460264 PGS1Q32NB8 556 aa17.06■□□□□ 0.32
COL5A1-203ENST00000460264 CHMP1BQ7LBR1 199 aa17.06■□□□□ 0.32
COL5A1-203ENST00000460264 FAF1Q9UNN5 650 aaPredicted RBP17.06■□□□□ 0.32
COL5A1-203ENST00000460264 VDAC3Q9Y277 283 aa17.06■□□□□ 0.32
COL5A1-203ENST00000460264 AKAP6Q13023 2319 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 A0A1W2PNV4 684 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 A0A1W2PQD3 144 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 SCDO00767 359 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 CFLARO15519 480 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 HPGDP15428 266 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 STX3Q13277 289 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 CD226Q15762 336 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 P4HA3Q7Z4N8 544 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 LUZP2Q86TE4 346 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 KIRREL3Q8IZU9 778 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 OR5AK3PQ8NH89 298 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 SMPDL3BQ92485 455 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 FIG4Q92562 907 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 MOAP1Q96BY2 351 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 GPATCH1Q9BRR8 931 aaKnown RBP17.05■□□□□ 0.32
COL5A1-203ENST00000460264 RBM24Q9BX46 236 aaKnown RBP17.05■□□□□ 0.32
COL5A1-203ENST00000460264 PINK1Q9BXM7 581 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 PIGMQ9H3S5 423 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 DNAJB12Q9NXW2 375 aaKnown RBP17.05■□□□□ 0.32
COL5A1-203ENST00000460264 GALNT8Q9NY28 637 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 AP4B1Q9Y6B7 739 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 HIVEP1P15822 2718 aa17.05■□□□□ 0.32
COL5A1-203ENST00000460264 A0A087WZY1 265 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 FAM221AA4D161 298 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 C7orf72A4D263 438 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 TUBAL3A6NHL2 446 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 A6NNC1 897 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 TNFRSF21O75509 655 aa17.04■□□□□ 0.32
COL5A1-203ENST00000460264 CRHP06850 196 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms