RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 FAM25CB3EWG5 89 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 FAM25GB3EWG6 89 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 CLIC1O00299 241 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 B4GALT2O60909 372 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 CTNSO60931 367 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 JMJD7P0C870 316 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 ATXN8OSP0DMR3 200 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 CCL4P13236 92 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 ANXA8P13928 327 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 CPMP14384 443 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 ITGA2P17301 1181 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 SLC15A1P46059 708 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 HSD17B7P56937 341 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 NHLH1Q02575 133 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 STX4Q12846 297 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 BIKQ13323 160 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 CEBPEQ15744 281 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 SMN1Q16637 294 aaKnown RBP14.77□□□□□ -0.05
SNX17-204ENST00000453453 ATAD3CQ5T2N8 411 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 HES3Q5TGS1 186 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 RAB11FIP2Q7L804 512 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 CCDC116Q8IYX3 515 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 CLIP4Q8N3C7 705 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 C7orf57Q8NEG2 295 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 OR7G1Q8NGA0 311 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 WDFY2Q96P53 400 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 ZPBPQ9BS86 351 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 SLC35A5Q9BS91 424 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 TPT1P8Q9HAU6 139 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 SLC6A13Q9NSD5 602 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 TMEM184BQ9Y519 407 aaPredicted RBP14.77□□□□□ -0.05
SNX17-204ENST00000453453 N6AMT1Q9Y5N5 214 aa14.77□□□□□ -0.05
SNX17-204ENST00000453453 CCDC187A0A096LP49 1063 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 SH3D21A4FU49 640 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 EFCAB10A6NFE3 127 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 HMX3A6NHT5 357 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 PCNX2A6NKB5 2137 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 FGF17O60258 216 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 LDB3O75112 727 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 SLITRK5O94991 958 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 ALX3O95076 343 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 TIAF1O95411 115 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 FTH1P19P0C7X4 201 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 RGS6P49758 472 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 DCDP81605 110 aaKnown RBP14.76□□□□□ -0.05
SNX17-204ENST00000453453 VLDLRP98155 873 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 IL1RL1Q01638 556 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 GPR50Q13585 617 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 ZFP69Q49AA0 526 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 DCAF12Q5T6F0 453 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 MFSD4BQ5TF39 518 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 BHLHB9Q6PI77 547 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 ANGPTL8Q6UXH0 198 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 RNF130Q86XS8 419 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 OR4N5Q8IXE1 308 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 TMEM52Q8NDY8 209 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.76□□□□□ -0.05
SNX17-204ENST00000453453 MOAP1Q96BY2 351 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 HSH2DQ96JZ2 352 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 ZNF681Q96N22 645 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 DPH2Q9BQC3 489 aaPredicted RBP14.76□□□□□ -0.05
SNX17-204ENST00000453453 SLC30A2Q9BRI3 323 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 CDCA4Q9BXL8 241 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 MMACHCQ9Y4U1 282 aa14.76□□□□□ -0.05
SNX17-204ENST00000453453 SLC35F4A4IF30 521 aa14.75□□□□□ -0.05
SNX17-204ENST00000453453 CENPXA8MT69 81 aa14.75□□□□□ -0.05
SNX17-204ENST00000453453 ADAMDEC1O15204 470 aa14.75□□□□□ -0.05
SNX17-204ENST00000453453 MPZL2O60487 215 aa14.75□□□□□ -0.05
SNX17-204ENST00000453453 ADORA3P0DMS8 318 aa14.75□□□□□ -0.05
SNX17-204ENST00000453453 GTF2E2P29084 291 aaKnown RBP14.75□□□□□ -0.05
SNX17-204ENST00000453453 GAB1Q13480 694 aa14.75□□□□□ -0.05
SNX17-204ENST00000453453 IQCCQ4KMZ1 466 aa14.75□□□□□ -0.05
SNX17-204ENST00000453453 NKAIN1Q4KMZ8 207 aa14.75□□□□□ -0.05
SNX17-204ENST00000453453 VASH1Q7L8A9 365 aaPredicted RBP14.75□□□□□ -0.05
SNX17-204ENST00000453453 RAB43Q86YS6 212 aa14.75□□□□□ -0.05
SNX17-204ENST00000453453 SFXN5Q8TD22 340 aa14.75□□□□□ -0.05
SNX17-204ENST00000453453 GGHQ92820 318 aa14.75□□□□□ -0.05
SNX17-204ENST00000453453 PHOX2BQ99453 314 aa14.75□□□□□ -0.05
SNX17-204ENST00000453453 PELOQ9BRX2 385 aaKnown RBP14.75□□□□□ -0.05
SNX17-204ENST00000453453 CXorf36Q9H7Y0 433 aa14.75□□□□□ -0.05
SNX17-204ENST00000453453 ADPRHL2Q9NX46 363 aa14.75□□□□□ -0.05
SNX17-204ENST00000453453 WDR87Q6ZQQ6 2873 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 SPAARA0A1B0GVQ0 90 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 OR10H2O60403 315 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 CDC123O75794 336 aaPredicted RBP14.74□□□□□ -0.05
SNX17-204ENST00000453453 KCNK5O95279 499 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 KLK3P07288 261 aaPredicted RBP14.74□□□□□ -0.05
SNX17-204ENST00000453453 SLC35E2P0CK97 266 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 CCT3P49368 545 aaKnown RBP14.74□□□□□ -0.05
SNX17-204ENST00000453453 PRR5P85299 388 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 ID2Q02363 134 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 SERTAD2Q14140 314 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 ZNF750Q32MQ0 723 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 ARMCX4Q5H9R4 360 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 TMEM64Q6YI46 380 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 MED25Q71SY5 747 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 SZRD1Q7Z422 152 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 ZNF605Q86T29 641 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 OR5AK3PQ8NH89 298 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 SUN3Q8TAQ9 357 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms