RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 PCDHGA3Q9Y5H0 932 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 A0A1W2PPW3 197 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 CLCA1A8K7I4 914 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 KDM4EB2RXH2 506 aaPredicted RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 PATE3B3GLJ2 98 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 AP3D1O14617 1153 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 MRPS14O60783 128 aaKnown RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 ENTPD6O75354 484 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 SOX14O95416 240 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 PSKH1P11801 424 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 BLKP51451 505 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 TMBIM6P55061 237 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 EGR4Q05215 589 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 FGFBP1Q14512 234 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 TBCEQ15813 527 aaPredicted RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 DECR1Q16698 335 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 SOWAHCQ53LP3 525 aaPredicted RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 SYT14P1Q58G82 188 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 AADACL4Q5VUY2 407 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 GUSBP11Q6P575 273 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 THSD4Q6ZMP0 1018 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 SLC46A3Q7Z3Q1 461 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 GKN2Q86XP6 184 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 SLITRK4Q8IW52 837 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 ZNF619Q8N2I2 560 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 OR4K5Q8NGD3 323 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 OR52P1PQ8NH57 321 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 TSLPQ969D9 159 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 TGM7Q96PF1 710 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 OR5M11Q96RB7 305 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 NPAS1Q99742 590 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 IER2Q9BTL4 223 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 RASSF1Q9NS23 344 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 OSGIN1Q9UJX0 560 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 ZNF318Q5VUA4 2279 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 MAN1A2O60476 641 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 H1F0P07305 194 aaKnown RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 BUD31P41223 144 aaPredicted RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 PRKAG1P54619 331 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 CTBP2P56545 445 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 RPS4XP62701 263 aaKnown RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 PRR5P85299 388 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 TUBA3CQ13748 450 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.08□□□□□ -1.44
USP46-202ENST00000451218 NDUFAF6Q330K2 333 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 KRT80Q6KB66 452 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 BHLHB9Q6PI77 547 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 LYPD8Q6UX82 237 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 OR2I1PQ8NGU4 316 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 OR4C3Q8NH37 302 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 NDNFQ8TB73 568 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 LRRC46Q96FV0 321 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 PEX11GQ96HA9 241 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 OPALINQ96PE5 141 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 BBS4Q96RK4 519 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 ELF4Q99607 663 aaPredicted RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 SLX1AQ9BQ83 275 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 JAM3Q9BX67 310 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 IRF2BPLQ9H1B7 796 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 AKIRIN1Q9H9L7 192 aaPredicted RBP6.08□□□□□ -1.44
USP46-202ENST00000451218 NLGN3Q9NZ94 848 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 CLEC2DQ9UHP7 191 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 GMPPBQ9Y5P6 360 aa6.08□□□□□ -1.44
USP46-202ENST00000451218 H3BUI4 141 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 SURF4O15260 269 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 TRMUO75648 421 aaKnown RBP6.07□□□□□ -1.44
USP46-202ENST00000451218 ZBTB11O95625 1053 aaPredicted RBP6.07□□□□□ -1.44
USP46-202ENST00000451218 GKN3PP0CG01 181 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 CXCL12P48061 93 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 IFITM3Q01628 133 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 OCLNQ16625 522 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 GARNL3Q5VVW2 1013 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 ZNF620Q6ZNG0 422 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 VWA5B2Q8N398 1253 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 FAM26EQ8N5C1 309 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 LRRC75AQ8NAA5 344 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 APCDD1LQ8NCL9 501 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 OR51Q1Q8NH59 317 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 TM9SF4Q92544 642 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 SEMA4CQ9C0C4 833 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 TGIF2Q9GZN2 237 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 HHATLQ9HCP6 504 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 SEC14L3Q9UDX4 400 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 BAG5Q9UL15 447 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 IGHV5-10-1A0A0J9YXX1 117 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 CDC123O75794 336 aaPredicted RBP6.07□□□□□ -1.44
USP46-202ENST00000451218 CYP7B1O75881 506 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 SLC2A10O95528 541 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 LALBAP00709 142 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 TAGLNQ01995 201 aaKnown RBP6.07□□□□□ -1.44
USP46-202ENST00000451218 SKP2Q13309 424 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 NEDD8Q15843 81 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 MFSD4BQ5TF39 518 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 QSOX2Q6ZRP7 698 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 MFSD4AQ8N468 514 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 METTL27Q8N6F8 245 aaPredicted RBP6.07□□□□□ -1.44
USP46-202ENST00000451218 BCORP1Q8N888 145 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 BPIFB6Q8NFQ5 453 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 OR4C6Q8NH72 309 aa6.07□□□□□ -1.44
USP46-202ENST00000451218 CNOT9Q92600 299 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms