RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 HS6ST1O60243 411 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 FADS1O60427 444 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 STX11O75558 287 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 PDE9AO76083 593 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 SORBS2O94875 1100 aaKnown RBP11.93□□□□□ -0.5
VPS33A-202ENST00000451053 H6PDO95479 791 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 PRB1P04280 392 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 BCHEP06276 602 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 TFPTP0C1Z6 253 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 NR2F1P10589 423 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 GGT1P19440 569 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 CNR1P21554 472 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 EVI2BP34910 448 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 MEOX1P50221 254 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 ACTR3P61158 418 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 RPP38P78345 283 aaKnown RBP11.93□□□□□ -0.5
VPS33A-202ENST00000451053 HPCAP84074 193 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 CDK6Q00534 326 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 SCARB2Q14108 478 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 GPAT3Q53EU6 434 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 SOWAHCQ53LP3 525 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-202ENST00000451053 PRAMEF8Q5VWM4 474 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 PRAMEF7Q5VXH5 474 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 GLYATQ6IB77 296 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 FRRS1Q6ZNA5 592 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-202ENST00000451053 POGLUT1Q8NBL1 392 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 HIPK4Q8NE63 616 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 OR2M7Q8NG81 312 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 OR52E4Q8NGH9 312 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 OR4C3Q8NH37 302 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 STMN2Q93045 179 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 NTNG2Q96CW9 530 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 NSMCE2Q96MF7 247 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 TRNT1Q96Q11 434 aaKnown RBP11.93□□□□□ -0.5
VPS33A-202ENST00000451053 OSBPL11Q9BXB4 747 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 ANGPTL4Q9BY76 406 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 RTN4RQ9BZR6 473 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 PCDHAC1Q9H158 963 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 RUBCNLQ9H714 662 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 GORASP2Q9H8Y8 452 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 TUBA8Q9NY65 449 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-202ENST00000451053 KLRF1Q9NZS2 232 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 EGFL7Q9UHF1 273 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 MKLN1Q9UL63 735 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 HRH3Q9Y5N1 445 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 CENPVL1A0A0U1RR11 272 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 ANKRD33BA6NCL7 494 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 AQP12BA6NM10 295 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 NPIPB9F8W1W9 429 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 SLC28A2O43868 658 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 KIAA0513O60268 411 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 OXSR1O95747 527 aaPredicted RBP11.92□□□□□ -0.5
VPS33A-202ENST00000451053 IFNA14P01570 189 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 LCN1P31025 176 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 MSX2P35548 267 aaPredicted RBP11.92□□□□□ -0.5
VPS33A-202ENST00000451053 DCTP40126 519 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 RFC3P40938 356 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 RNF144AP50876 292 aaPredicted RBP11.92□□□□□ -0.5
VPS33A-202ENST00000451053 CRISP3P54108 245 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 GAS1P54826 345 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 CHRNEQ04844 493 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 INPP5JQ15735 1006 aaPredicted RBP11.92□□□□□ -0.5
VPS33A-202ENST00000451053 GPR68Q15743 365 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 ADRM1Q16186 407 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 FLYWCH1Q4VC44 716 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 PRR30Q53SZ7 412 aaPredicted RBP11.92□□□□□ -0.5
VPS33A-202ENST00000451053 RPS26P11Q5JNZ5 115 aaPredicted RBP11.92□□□□□ -0.5
VPS33A-202ENST00000451053 TYW3Q6IPR3 259 aaKnown RBP11.92□□□□□ -0.5
VPS33A-202ENST00000451053 REEP3Q6NUK4 255 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 RPUSD3Q6P087 351 aaKnown RBP11.92□□□□□ -0.5
VPS33A-202ENST00000451053 TMEM81Q6P7N7 255 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 APOOLQ6UXV4 268 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 HMGN2P46Q86SG4 172 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 PATL1Q86TB9 770 aaKnown RBP11.92□□□□□ -0.5
VPS33A-202ENST00000451053 MARCH3Q86UD3 253 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 AQP12AQ8IXF9 295 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 BHLHE22Q8NFJ8 381 aaPredicted RBP11.92□□□□□ -0.5
VPS33A-202ENST00000451053 SLC38A5Q8WUX1 472 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 FIG4Q92562 907 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 FAM162AQ96A26 154 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 TMEM19Q96HH6 336 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 RNF145Q96MT1 663 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 TAAR6Q96RI8 345 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 FAM173AQ9BQD7 235 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 DOHHQ9BU89 302 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 SAP130Q9H0E3 1048 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 SLC38A1Q9H2H9 487 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 DENND2DQ9H6A0 471 aaPredicted RBP11.92□□□□□ -0.5
VPS33A-202ENST00000451053 POLE3Q9NRF9 147 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 KCNE5Q9UJ90 142 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 ABCG2Q9UNQ0 655 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 WDR45Q9Y484 360 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 EML6Q6ZMW3 1958 aa11.92□□□□□ -0.5
VPS33A-202ENST00000451053 LRRC3CA6NJW4 275 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 KLRC4-KLRK1H3BQV0 150 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 TRIM3O75382 744 aaPredicted RBP11.91□□□□□ -0.5
VPS33A-202ENST00000451053 RASAL1O95294 804 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 NGFRP08138 427 aa11.91□□□□□ -0.5
VPS33A-202ENST00000451053 HOXB6P17509 224 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms