RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 CDK2AP1O14519 115 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 ICOSLGO75144 302 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 TIPRLO75663 272 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 PRSS23O95084 383 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 IFNW1P05000 195 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 FASP25445 335 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 PLAURQ03405 335 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 SRSF6Q13247 344 aaKnown RBP17.71■□□□□ 0.43
RPS28-202ENST00000449223 ATP6AP1Q15904 470 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 ZNF791Q3KP31 576 aaPredicted RBP17.71■□□□□ 0.43
RPS28-202ENST00000449223 GRAMD1BQ3KR37 738 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 MRPL2Q5T653 305 aaKnown RBP17.71■□□□□ 0.43
RPS28-202ENST00000449223 NUP54Q7Z3B4 507 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 CLEC1AQ8NC01 280 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 FAM71CQ8NEG0 241 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 HGDQ93099 445 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 SPACA9Q96E40 222 aaPredicted RBP17.71■□□□□ 0.43
RPS28-202ENST00000449223 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.71■□□□□ 0.43
RPS28-202ENST00000449223 KLHL28Q9NXS3 571 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 NDUFAF4Q9P032 175 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 SH3GLB1Q9Y371 365 aa17.71■□□□□ 0.43
RPS28-202ENST00000449223 SERINC4A6NH21 518 aa17.7■□□□□ 0.42
RPS28-202ENST00000449223 ALG1L2C9J202 215 aa17.7■□□□□ 0.42
RPS28-202ENST00000449223 MASP2O00187 686 aa17.7■□□□□ 0.42
RPS28-202ENST00000449223 ITGA2P17301 1181 aa17.7■□□□□ 0.42
RPS28-202ENST00000449223 SLC34A1Q06495 639 aa17.7■□□□□ 0.42
RPS28-202ENST00000449223 TMEM81Q6P7N7 255 aa17.7■□□□□ 0.42
RPS28-202ENST00000449223 OPN5Q6U736 354 aa17.7■□□□□ 0.42
RPS28-202ENST00000449223 HMGN2P46Q86SG4 172 aa17.7■□□□□ 0.42
RPS28-202ENST00000449223 CARM1Q86X55 608 aa17.7■□□□□ 0.42
RPS28-202ENST00000449223 CLIP4Q8N3C7 705 aa17.7■□□□□ 0.42
RPS28-202ENST00000449223 LRTOMTQ8WZ04 291 aa17.7■□□□□ 0.42
RPS28-202ENST00000449223 ZNF300Q96RE9 604 aaPredicted RBP17.7■□□□□ 0.42
RPS28-202ENST00000449223 SECISBP2Q96T21 854 aaKnown RBP17.7■□□□□ 0.42
RPS28-202ENST00000449223 AMBRA1Q9C0C7 1298 aa17.7■□□□□ 0.42
RPS28-202ENST00000449223 LHPPQ9H008 270 aa17.7■□□□□ 0.42
RPS28-202ENST00000449223 SLC35A3Q9Y2D2 325 aa17.7■□□□□ 0.42
RPS28-202ENST00000449223 CLDN24A6NM45 220 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 SCDO00767 359 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 NKX2-8O15522 239 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 FADS1O60427 444 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 DEAF1O75398 565 aaPredicted RBP17.69■□□□□ 0.42
RPS28-202ENST00000449223 CAPNS1P04632 268 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 ENDOUP21128 410 aaKnown RBP17.69■□□□□ 0.42
RPS28-202ENST00000449223 OR1E2P47887 323 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 POGLUT1Q8NBL1 392 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 OR4D11Q8NGI4 311 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 BRIX1Q8TDN6 353 aaKnown RBP17.69■□□□□ 0.42
RPS28-202ENST00000449223 PHF10Q8WUB8 498 aaKnown RBP17.69■□□□□ 0.42
RPS28-202ENST00000449223 TMCO6Q96DC7 493 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 NAF1Q96HR8 494 aaKnown RBP17.69■□□□□ 0.42
RPS28-202ENST00000449223 CCNL2Q96S94 520 aaPredicted RBP17.69■□□□□ 0.42
RPS28-202ENST00000449223 ZNF347Q96SE7 839 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 PKP2Q99959 881 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 WFDC6Q9BQY6 131 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 CDCP1Q9H5V8 836 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 RLIMQ9NVW2 624 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 FLRT3Q9NZU0 649 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 SLC13A4Q9UKG4 626 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 ACAD8Q9UKU7 415 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 ENPP4Q9Y6X5 453 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 MED13Q9UHV7 2174 aa17.69■□□□□ 0.42
RPS28-202ENST00000449223 APC2O95996 2303 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 ADAM10O14672 748 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 CASQ2O14958 399 aaPredicted RBP17.68■□□□□ 0.42
RPS28-202ENST00000449223 DNAJB5O75953 348 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 MT-ND1P03886 318 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 TNFRSF1BP20333 461 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 EVI2BP34910 448 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 SOX3P41225 446 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 SSR4P51571 173 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 CDC20Q12834 499 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 MEP1AQ16819 746 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 HMBOX1Q6NT76 420 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 APOOLQ6UXV4 268 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 OR6T1Q8NGN1 323 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 CENPNQ96H22 339 aaPredicted RBP17.68■□□□□ 0.42
RPS28-202ENST00000449223 THOC3Q96J01 351 aaKnown RBP17.68■□□□□ 0.42
RPS28-202ENST00000449223 ZBTB20Q9HC78 741 aaPredicted RBP17.68■□□□□ 0.42
RPS28-202ENST00000449223 EXOSC3Q9NQT5 275 aaKnown RBP17.68■□□□□ 0.42
RPS28-202ENST00000449223 DNAJB12Q9NXW2 375 aaKnown RBP17.68■□□□□ 0.42
RPS28-202ENST00000449223 DNAJB9Q9UBS3 223 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 POLHQ9Y253 713 aa17.68■□□□□ 0.42
RPS28-202ENST00000449223 CLOCKO15516 846 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 EFSO43281 561 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 MAN1A2O60476 641 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 FMO6PO60774 539 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 SEMA7AO75326 666 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 LDLRP01130 860 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 HPGDP15428 266 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 RHCEP18577 417 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 ZNF136P52737 540 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 FBXW4P57775 412 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 NPTX1Q15818 432 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 ACER2Q5QJU3 275 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 ATP1A1-AS1Q5TC04 95 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 DESI1Q6ICB0 168 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 ZNF605Q86T29 641 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 LACC1Q8IV20 430 aa17.67■□□□□ 0.42
RPS28-202ENST00000449223 GPALPP1Q8IXQ4 340 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms