RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 LRRC6Q86X45 466 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 CARM1Q86X55 608 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 GPATCH11Q8N954 259 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 C7orf57Q8NEG2 295 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 C17orf47Q8NEP4 570 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 OR4L1Q8NH43 312 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 NEU4Q8WWR8 484 aaPredicted RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 ZNF669Q96BR6 464 aaPredicted RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 MS4A6EQ96DS6 147 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 ZNF503Q96F45 646 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 ADGRG7Q96K78 797 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 BIRC8Q96P09 236 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 COL21A1Q96P44 957 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 QKIQ96PU8 341 aaKnown RBP eCLIP2.8□□□□□ -1.967e-8■■■■□ 22.9
PMS1-215ENST00000447232 ERVK-6Q9BXR3 956 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 DDX47Q9H0S4 455 aaKnown RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 RAB1BQ9H0U4 201 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 PLK3Q9H4B4 646 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 PLEK2Q9NYT0 353 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 TAS2R16Q9NYV7 291 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 TREM2Q9NZC2 230 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 DKKL1Q9UK85 242 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 RIMKLBQ9ULI2 386 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 ERVK-19Q9WJR5 959 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 SLC25A15Q9Y619 301 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 ATP23Q9Y6H3 246 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 A0A0G2JN53 185 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 EFCAB8A8MWE9 144 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 B9A039 149 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 PLPP2O43688 288 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 B3GALT2O43825 422 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 FGF17O60258 216 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 PIP5K1CO60331 668 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 LYZL6O75951 148 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 SYF2O95926 243 aaKnown RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 TCEA1P23193 301 aaKnown RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 GATA3P23771 443 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 EEF1GP26641 437 aaKnown RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 HNRNPH1P31943 449 aaKnown RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 PPARGP37231 505 aaPredicted RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 RPS13P62277 151 aaKnown RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 DYNLT1P63172 113 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 REEP5Q00765 189 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 MYBPC1Q00872 1141 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 SGCBQ16585 318 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 KLF17Q5JT82 389 aaPredicted RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 CCDC181Q5TID7 509 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 ITPRIPL1Q6GPH6 555 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 KLHL17Q6TDP4 642 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 NUP54Q7Z3B4 507 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 ZNF571Q7Z3V5 609 aaPredicted RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 NUFIP2Q7Z417 695 aaKnown RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 OR4N5Q8IXE1 308 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 PRR22Q8IZ63 422 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 GBP7Q8N8V2 638 aaPredicted RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 LINC01006Q8NI28 216 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 RNF138Q8WVD3 245 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 PPWD1Q96BP3 646 aaKnown RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 OR4K3Q96R72 315 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 SPATA9Q9BWV2 254 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 FKRPQ9H9S5 495 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 KLRF1Q9NZS2 232 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 MARCH4Q9P2E8 410 aaPredicted RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 KLHL42Q9P2K6 505 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 GALPQ9UBC7 116 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 SLC2A6Q9UGQ3 507 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 RPUSD1Q9UJJ7 312 aaKnown RBP2.8□□□□□ -1.96
PMS1-215ENST00000447232 NUP50Q9UKX7 468 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 NENFQ9UMX5 172 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 SPACA6W5XKT8 324 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 PCNX3Q9H6A9 2034 aa2.8□□□□□ -1.96
PMS1-215ENST00000447232 ARHGAP32A7KAX9 2087 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 OR2M5A3KFT3 312 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 CCDC151A5D8V7 595 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 LRIT2A6NDA9 550 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 PRAMEF25A6NGN4 478 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 NPIPB8E9PQR5 432 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 LYNX1G3V0Z9 82 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 KLF11O14901 512 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 ERI3O43414 337 aaKnown RBP2.79□□□□□ -1.96
PMS1-215ENST00000447232 UGT2B11O75310 529 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 NIPSNAP2O75323 286 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 PROSCO94903 275 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 MPZL1O95297 269 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 TBX6O95947 436 aaPredicted RBP2.79□□□□□ -1.96
PMS1-215ENST00000447232 NHLRC4P0CG21 123 aaPredicted RBP2.79□□□□□ -1.96
PMS1-215ENST00000447232 LYNX1P0DP58 116 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 ANPEPP15144 967 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 GGT1P19440 569 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 CCND1P24385 295 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 CNTFP26441 200 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 SERPINF1P36955 418 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 RFX3P48380 749 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 TTPAP49638 278 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 ZNF83P51522 516 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 GAS1P54826 345 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 DSCR4P56555 118 aaPredicted RBP2.79□□□□□ -1.96
PMS1-215ENST00000447232 NRG3P56975 720 aa2.79□□□□□ -1.96
PMS1-215ENST00000447232 STXBP1P61764 594 aaKnown RBP2.79□□□□□ -1.96
PMS1-215ENST00000447232 RCN2Q14257 317 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms