RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PGM2Q96G03 612 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 DUSP26Q9BV47 211 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 BHLHE41Q9C0J9 482 aaPredicted RBP18.15■□□□□ 0.5
LRCH3-208ENST00000443727 UBQLN4Q9NRR5 601 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 CLCF1Q9UBD9 225 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.15■□□□□ 0.5
LRCH3-208ENST00000443727 ZNF337Q9Y3M9 751 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 ACTL7BQ9Y614 415 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 OTOGQ6ZRI0 2925 aa18.15■□□□□ 0.5
LRCH3-208ENST00000443727 ANKHD1Q8IWZ3 2542 aaKnown RBP18.14■□□□□ 0.49
LRCH3-208ENST00000443727 IGLV3-32A0A0A0MS00 114 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 OR2M5A3KFT3 312 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 ALG1L2C9J202 215 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 NGFRP08138 427 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 KRT16P08779 473 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 BGNP21810 368 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 LCN1P31025 176 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 SOAT1P35610 550 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 EEF1A1P68104 462 aaKnown RBP18.14■□□□□ 0.49
LRCH3-208ENST00000443727 STX3Q13277 289 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 GLYR1Q49A26 553 aaPredicted RBP18.14■□□□□ 0.49
LRCH3-208ENST00000443727 EEF1A1P5Q5VTE0 462 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 ANKRD42Q8N9B4 389 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 FAM110BQ8TC76 370 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 ADAMTS15Q8TE58 950 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 FAM222BQ8WU58 562 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 CDS1Q92903 461 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 STACQ99469 402 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 ACTRT3Q9BYD9 372 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 CXorf36Q9H7Y0 433 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 AKTIPQ9H8T0 292 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 NEUROD4Q9HD90 331 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 DUSP22Q9NRW4 184 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 DNAJB12Q9NXW2 375 aaKnown RBP18.14■□□□□ 0.49
LRCH3-208ENST00000443727 STOML1Q9UBI4 398 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 VDAC3Q9Y277 283 aa18.14■□□□□ 0.49
LRCH3-208ENST00000443727 ANKRD17O75179 2603 aaKnown RBP18.14■□□□□ 0.49
LRCH3-208ENST00000443727 KIAA1549Q9HCM3 1950 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 TUBAL3A6NHL2 446 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 TGM6O95932 706 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 DHRS4L1P0CG22 281 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 CLDN8P56748 225 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 MPP2Q14168 576 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 SMU1Q2TAY7 513 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 FLYWCH1Q4VC44 716 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 OR2A2Q6IF42 318 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 BHLHB9Q6PI77 547 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 ZAR1Q86SH2 424 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 LUZP2Q86TE4 346 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 RIMKLAQ8IXN7 391 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 PSMA8Q8TAA3 256 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 MOAP1Q96BY2 351 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 SH3YL1Q96HL8 342 aaPredicted RBP18.13■□□□□ 0.49
LRCH3-208ENST00000443727 RBM24Q9BX46 236 aaKnown RBP18.13■□□□□ 0.49
LRCH3-208ENST00000443727 PIGUQ9H490 435 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 FBXO34Q9NWN3 711 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 ASIC5Q9NY37 505 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 AP4B1Q9Y6B7 739 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 CSMD2Q7Z408 3487 aa18.13■□□□□ 0.49
LRCH3-208ENST00000443727 A0A087WZY1 265 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 SHISA8B8ZZ34 492 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 HCRTR2O43614 444 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 SOX30O94993 753 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 ZNF41P51814 821 aaPredicted RBP18.12■□□□□ 0.49
LRCH3-208ENST00000443727 RPS3AP61247 264 aaKnown RBP18.12■□□□□ 0.49
LRCH3-208ENST00000443727 FBXW10Q5XX13 1052 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 CDC73Q6P1J9 531 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 MISPQ8IVT2 679 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 CNEP1R1Q8N9A8 125 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 ZNF527Q8NB42 609 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 OR5AK3PQ8NH89 298 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 SFXN5Q8TD22 340 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 DOCK7Q96N67 2140 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 PINK1Q9BXM7 581 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 POLDIP3Q9BY77 421 aaKnown RBP18.12■□□□□ 0.49
LRCH3-208ENST00000443727 DPY30Q9C005 99 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 C20orf27Q9GZN8 174 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 PIGMQ9H3S5 423 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 GIN1Q9NXP7 522 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 JKAMPQ9P055 326 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 PACSIN3Q9UKS6 424 aa18.12■□□□□ 0.49
LRCH3-208ENST00000443727 H0YC42 278 aa18.11■□□□□ 0.49
LRCH3-208ENST00000443727 ERLIN1O75477 346 aa18.11■□□□□ 0.49
LRCH3-208ENST00000443727 CTAG2O75638 210 aa18.11■□□□□ 0.49
LRCH3-208ENST00000443727 SUCLG1P53597 346 aaKnown RBP18.11■□□□□ 0.49
LRCH3-208ENST00000443727 TPD52P55327 224 aaPredicted RBP18.11■□□□□ 0.49
LRCH3-208ENST00000443727 CLDN20P56880 219 aa18.11■□□□□ 0.49
LRCH3-208ENST00000443727 C21orf58P58505 322 aa18.11■□□□□ 0.49
LRCH3-208ENST00000443727 SGCBQ16585 318 aa18.11■□□□□ 0.49
LRCH3-208ENST00000443727 TNFAIP8L3Q5GJ75 292 aa18.11■□□□□ 0.49
LRCH3-208ENST00000443727 EXOSC6Q5RKV6 272 aaKnown RBP18.11■□□□□ 0.49
LRCH3-208ENST00000443727 PPP4R4Q6NUP7 873 aa18.11■□□□□ 0.49
LRCH3-208ENST00000443727 SORT1Q99523 831 aa18.11■□□□□ 0.49
LRCH3-208ENST00000443727 GPATCH1Q9BRR8 931 aaKnown RBP18.11■□□□□ 0.49
LRCH3-208ENST00000443727 NUF2Q9BZD4 464 aa18.11■□□□□ 0.49
LRCH3-208ENST00000443727 HOXD1Q9GZZ0 328 aa18.11■□□□□ 0.49
LRCH3-208ENST00000443727 GPATCH2Q9NW75 528 aa18.11■□□□□ 0.49
LRCH3-208ENST00000443727 PCDHGB4Q9UN71 923 aa18.11■□□□□ 0.49
LRCH3-208ENST00000443727 SPG11Q96JI7 2443 aa18.1■□□□□ 0.49
LRCH3-208ENST00000443727 A0A1W2PNV4 684 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms