RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 ZNF440Q8IYI8 595 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 NLGN4XQ8N0W4 816 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 SLC43A2Q8N370 569 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 ZNF615Q8N8J6 731 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 C16orf52Q8NHV5 167 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 CEP76Q8TAP6 659 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 DOK4Q8TEW6 326 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 GGHQ92820 318 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 ZNF501Q96CX3 271 aaPredicted RBP12.2□□□□□ -0.46
CPSF4-206ENST00000441580 FAM46AQ96IP4 442 aaKnown RBP12.2□□□□□ -0.46
CPSF4-206ENST00000441580 HS6ST2Q96MM7 605 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 PTCHD1Q96NR3 888 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 SLC46A1Q96NT5 459 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 NUDT22Q9BRQ3 303 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 RHNO1Q9BSD3 238 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 FUNDC2Q9BWH2 189 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 CDCA4Q9BXL8 241 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 TRIM2Q9C040 744 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 HOXD1Q9GZZ0 328 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 TMEM27Q9HBJ8 222 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 ZNF304Q9HCX3 659 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 NECTIN3Q9NQS3 549 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 FGF21Q9NSA1 209 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 MED17Q9NVC6 651 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 MRTO4Q9UKD2 239 aaKnown RBP12.2□□□□□ -0.46
CPSF4-206ENST00000441580 CBLCQ9ULV8 474 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 RPL36Q9Y3U8 105 aaKnown RBP12.2□□□□□ -0.46
CPSF4-206ENST00000441580 TMEM184BQ9Y519 407 aaPredicted RBP12.2□□□□□ -0.46
CPSF4-206ENST00000441580 MAU2Q9Y6X3 613 aa12.2□□□□□ -0.46
CPSF4-206ENST00000441580 SPTBN5Q9NRC6 3674 aaKnown RBP12.19□□□□□ -0.46
CPSF4-206ENST00000441580 NINQ8N4C6 2090 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 NPIPA5A0A0B4J1W7 369 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 FRG2CA6NGY1 282 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 CLDN24A6NM45 220 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 NPIPA7E9PJI5 369 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 NPIPB9F8W1W9 429 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 M0R129 80 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 CHP2O43745 196 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 CNOT3O75175 753 aaKnown RBP12.19□□□□□ -0.46
CPSF4-206ENST00000441580 ATE1O95260 518 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 NPIPA8P0DM63 369 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 ADORA3P0DMS8 318 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 FOLR1P15328 257 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 HTR2AP28223 471 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 RORAP35398 523 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 RBM34P42696 430 aaKnown RBP12.19□□□□□ -0.46
CPSF4-206ENST00000441580 SLC15A1P46059 708 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 DCAF7P61962 342 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 CDK5Q00535 292 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 NFATC3Q12968 1075 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 IRF3Q14653 427 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 GINS1Q14691 196 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 OR1Q1Q15612 314 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 PDZK1Q5T2W1 519 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 SLC16A12Q6ZSM3 486 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 NRMQ8IXM6 262 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 SHISA5Q8N114 240 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 FAM26EQ8N5C1 309 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 ZNF614Q8N883 585 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 ZNF527Q8NB42 609 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 POGLUT1Q8NBL1 392 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 B3GNT7Q8NFL0 401 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 OR4D9Q8NGE8 314 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 OR52L1Q8NGH7 329 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 PIGKQ92643 395 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 UBE2FQ969M7 185 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 YIPF6Q96EC8 236 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 CCNL2Q96S94 520 aaPredicted RBP12.19□□□□□ -0.46
CPSF4-206ENST00000441580 YIPF2Q9BWQ6 316 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 CAPN10Q9HC96 672 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 DNAJB12Q9NXW2 375 aaKnown RBP12.19□□□□□ -0.46
CPSF4-206ENST00000441580 GPR83Q9NYM4 423 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 KCNE5Q9UJ90 142 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 FBXO4Q9UKT5 387 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 SLC35A3Q9Y2D2 325 aa12.19□□□□□ -0.46
CPSF4-206ENST00000441580 XIRP2A4UGR9 3374 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 A0A0B4J2E0 115 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 A0A1B0GX12 115 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 TCRBV16S1A1N1A0A5B0 115 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 EFCAB7A8K855 629 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 PDGFBP01127 241 aaPredicted RBP12.18□□□□□ -0.46
CPSF4-206ENST00000441580 CLPSP04118 112 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 CFIP05156 583 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 CT45A8P0DMV1 189 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 CT45A9P0DMV2 189 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 DRD5P21918 477 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 ALAS2P22557 587 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 ACVR2AP27037 513 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 RFX3P48380 749 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 GIPRP48546 466 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 ATP12AP54707 1039 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 HOXC5Q00444 222 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 RHAGQ02094 409 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 CSTF1Q05048 431 aaKnown RBP12.18□□□□□ -0.46
CPSF4-206ENST00000441580 ZNF91Q05481 1191 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.18□□□□□ -0.46
CPSF4-206ENST00000441580 ST3GAL4Q11206 333 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 ERV3-1Q14264 604 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 HLA-BQ31612 363 aa12.18□□□□□ -0.46
CPSF4-206ENST00000441580 PGGHGQ32M88 737 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms