RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 RRASP10301 218 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 CLCNKAP51800 687 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 TBPL1P62380 186 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 TAP2Q03519 686 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 C9orf152Q5JTZ5 239 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 ELP2Q6IA86 826 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 CXXC5Q7LFL8 322 aaKnown RBP10.97□□□□□ -0.65
SMPD4-209ENST00000439886 RASGRP3Q8IV61 690 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 GPALPP1Q8IXQ4 340 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 OR13C5Q8NGS8 318 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 RIOK2Q9BVS4 552 aaKnown RBP10.97□□□□□ -0.65
SMPD4-209ENST00000439886 PAPOLGQ9BWT3 736 aaKnown RBP10.97□□□□□ -0.65
SMPD4-209ENST00000439886 POLDIP3Q9BY77 421 aaKnown RBP10.97□□□□□ -0.65
SMPD4-209ENST00000439886 ESRP2Q9H6T0 727 aaKnown RBP10.97□□□□□ -0.65
SMPD4-209ENST00000439886 SLC22A11Q9NSA0 550 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 NTNG1Q9Y2I2 539 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-209ENST00000439886 TRDV1A0A1B0GX56 115 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 C2orf74A8MZ97 194 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 MMP20O60882 483 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 C4BPBP20851 252 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 RAB40BQ12829 278 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 TPBGQ13641 420 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 GRB14Q14449 540 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 SLC25A35Q3KQZ1 300 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 C3orf38Q5JPI3 329 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 CLLU1Q5K131 121 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 ZNF697Q5TEC3 545 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 TXNDC8Q6A555 127 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 TPRG1Q6ZUI0 275 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 USP50Q70EL3 339 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-209ENST00000439886 DPPA2Q7Z7J5 298 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 LIX1LQ8IVB5 337 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 C2CD4CQ8TF44 421 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 BRI3BPQ8WY22 251 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 NR4A3Q92570 626 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 COL26A1Q96A83 441 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 MRPL48Q96GC5 212 aaKnown RBP10.97□□□□□ -0.65
SMPD4-209ENST00000439886 TREX2Q9BQ50 279 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-209ENST00000439886 ZCCHC2Q9C0B9 1178 aaKnown RBP10.97□□□□□ -0.65
SMPD4-209ENST00000439886 CHST8Q9H2A9 424 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 CACYBPQ9HB71 228 aaKnown RBP10.97□□□□□ -0.65
SMPD4-209ENST00000439886 COA4Q9NYJ1 87 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 AK6Q9Y3D8 172 aaKnown RBP10.97□□□□□ -0.65
SMPD4-209ENST00000439886 DOCK3Q8IZD9 2030 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 EFCAB14O75071 495 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 CBX7O95931 251 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 PTHLHP12272 177 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 RAB3BP20337 219 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 RAB13P51153 203 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 CTSCP53634 463 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 UBE2MP61081 183 aaKnown RBP10.97□□□□□ -0.65
SMPD4-209ENST00000439886 DEFA6Q01524 100 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 MPEG1Q2M385 716 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 PIP5KL1Q5T9C9 394 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 C12orf73Q69YU5 71 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 GRHL2Q6ISB3 625 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 FAM26EQ8N5C1 309 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 OR6S1Q8NH40 331 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 CHTF18Q8WVB6 975 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 RFKQ969G6 155 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 ORAI1Q96D31 301 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 POM121Q96HA1 1249 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 SORCS2Q96PQ0 1159 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 ORAI3Q9BRQ5 295 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 SH2B3Q9UQQ2 575 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 RCE1Q9Y256 329 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 NUBP2Q9Y5Y2 271 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 NR2C1P13056 603 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 UQCRC2P22695 453 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 NOS3P29474 1203 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 PYCR1P32322 319 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 OCLNQ16625 522 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 RTL10Q7L3V2 364 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 TAS1R1Q7RTX1 841 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 PRICKLE2Q7Z3G6 844 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 AVL9Q8NBF6 648 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 RELL2Q8NC24 303 aaPredicted RBP10.96□□□□□ -0.65
SMPD4-209ENST00000439886 ECHDC3Q96DC8 303 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 LURAP1Q96LR2 239 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 OR2M2Q96R28 347 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 SLC22A12Q96S37 553 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 ARHGAP9Q9BRR9 750 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 BTBD1Q9H0C5 482 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 AUNIPQ9H7T9 357 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 BIN3Q9NQY0 253 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 DLL4Q9NR61 685 aa10.96□□□□□ -0.65
SMPD4-209ENST00000439886 ZNF840PA6NDX5 716 aa10.96□□□□□ -0.66
SMPD4-209ENST00000439886 SEMA7AO75326 666 aa10.96□□□□□ -0.66
SMPD4-209ENST00000439886 IL33O95760 270 aa10.96□□□□□ -0.66
SMPD4-209ENST00000439886 CBR1P16152 277 aa10.96□□□□□ -0.66
SMPD4-209ENST00000439886 OPRD1P41143 372 aa10.96□□□□□ -0.66
SMPD4-209ENST00000439886 SNRPD1P62314 119 aaKnown RBP10.96□□□□□ -0.66
SMPD4-209ENST00000439886 BTG1P62324 171 aa10.96□□□□□ -0.66
SMPD4-209ENST00000439886 BAMBIQ13145 260 aa10.96□□□□□ -0.66
SMPD4-209ENST00000439886 PRSS53Q2L4Q9 553 aa10.96□□□□□ -0.66
SMPD4-209ENST00000439886 METAP1DQ6UB28 335 aaPredicted RBP10.96□□□□□ -0.66
SMPD4-209ENST00000439886 FAM198BQ6UWH4 519 aa10.96□□□□□ -0.66
SMPD4-209ENST00000439886 Q6ZVU0 165 aa10.96□□□□□ -0.66
SMPD4-209ENST00000439886 NLRC3Q7RTR2 1065 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms