RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 KCNE3Q9Y6H6 103 aa21.77■■□□□ 1.08
CPNE1-217ENST00000439669 IGLV3-32A0A0A0MS00 114 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 CD8B2A6NJW9 211 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 SOX30O94993 753 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 IL2RAP01589 272 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 MATN1P21941 496 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 LHX2P50458 406 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 B3GALT5-AS1P59052 145 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 SLC9B1Q4ZJI4 515 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 MEX3BQ6ZN04 569 aaKnown RBP21.76■■□□□ 1.07
CPNE1-217ENST00000439669 MAVSQ7Z434 540 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 LIX1LQ8IVB5 337 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 ZPLD1Q8TCW7 415 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 MARK4Q96L34 752 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 SH3GL2Q99962 352 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 VIPAS39Q9H9C1 493 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 GPR45Q9Y5Y3 372 aa21.76■■□□□ 1.07
CPNE1-217ENST00000439669 NPIPA5A0A0B4J1W7 369 aa21.75■■□□□ 1.07
CPNE1-217ENST00000439669 HMGB1P1B2RPK0 211 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-217ENST00000439669 NPIPA7E9PJI5 369 aa21.75■■□□□ 1.07
CPNE1-217ENST00000439669 DIAPH2O60879 1101 aa21.75■■□□□ 1.07
CPNE1-217ENST00000439669 SCN2BO60939 215 aa21.75■■□□□ 1.07
CPNE1-217ENST00000439669 NPIPA8P0DM63 369 aa21.75■■□□□ 1.07
CPNE1-217ENST00000439669 PRF1P14222 555 aa21.75■■□□□ 1.07
CPNE1-217ENST00000439669 POU3F2P20265 443 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-217ENST00000439669 TIMP3P35625 211 aa21.75■■□□□ 1.07
CPNE1-217ENST00000439669 SLC25A35Q3KQZ1 300 aa21.75■■□□□ 1.07
CPNE1-217ENST00000439669 NAXEQ8NCW5 288 aa21.75■■□□□ 1.07
CPNE1-217ENST00000439669 OR5M1Q8NGP8 315 aa21.75■■□□□ 1.07
CPNE1-217ENST00000439669 DYDC1Q8WWB3 177 aa21.75■■□□□ 1.07
CPNE1-217ENST00000439669 MAELQ96JY0 434 aaKnown RBP21.75■■□□□ 1.07
CPNE1-217ENST00000439669 SERHL2Q9H4I8 314 aa21.75■■□□□ 1.07
CPNE1-217ENST00000439669 NPDC1Q9NQX5 325 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-217ENST00000439669 NAV2Q8IVL1 2488 aa21.75■■□□□ 1.07
CPNE1-217ENST00000439669 IDO1P14902 403 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 ZNF708P17019 499 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 UQCRC2P22695 453 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 CEACAM8P31997 349 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-217ENST00000439669 DGKQP52824 942 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 CLDN18P56856 261 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 TFF3Q07654 80 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 FLYWCH1Q4VC44 716 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 MISPQ8IVT2 679 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 UBQLNLQ8IYU4 475 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 ZNF527Q8NB42 609 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 ACTRT2Q8TDY3 377 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 SH3YL1Q96HL8 342 aaPredicted RBP21.74■■□□□ 1.07
CPNE1-217ENST00000439669 SPOCK3Q9BQ16 436 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 PIGQQ9BRB3 760 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 CALHM2Q9HA72 323 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 VDAC3Q9Y277 283 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 USH1CQ9Y6N9 552 aa21.74■■□□□ 1.07
CPNE1-217ENST00000439669 A0A1W2PQD3 144 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 MBD3L4A6NDZ8 208 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-217ENST00000439669 MBD3L3A6NE82 208 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-217ENST00000439669 MBD3L5A6NJ08 208 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-217ENST00000439669 DUXAA6NLW8 204 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 CLCA1A8K7I4 914 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 DVL2O14641 736 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 PEPDP12955 493 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 BMP5P22003 454 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 MSX1P28360 303 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 IL12AP29459 219 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 CHI3L1P36222 383 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-217ENST00000439669 CASP9P55211 416 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 CD226Q15762 336 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 ARSKQ6UWY0 536 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 CHMP1BQ7LBR1 199 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 GDF7Q7Z4P5 450 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 ZNF614Q8N883 585 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 MBD3L2Q8NHZ7 208 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-217ENST00000439669 C7orf26Q96N11 449 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 OR52B2Q96RD2 323 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 OR52E6Q96RD3 313 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 HOXD1Q9GZZ0 328 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 ENKD1Q9H0I2 346 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 OR51I1Q9H343 314 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 PKDREJQ9NTG1 2253 aa21.73■■□□□ 1.07
CPNE1-217ENST00000439669 KIAA1549Q9HCM3 1950 aa21.72■■□□□ 1.07
CPNE1-217ENST00000439669 OR2M5A3KFT3 312 aa21.72■■□□□ 1.07
CPNE1-217ENST00000439669 H3BML4 177 aa21.72■■□□□ 1.07
CPNE1-217ENST00000439669 PGRP06401 933 aa21.72■■□□□ 1.07
CPNE1-217ENST00000439669 RNF144AP50876 292 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-217ENST00000439669 BCL2A1Q16548 175 aa21.72■■□□□ 1.07
CPNE1-217ENST00000439669 GLYR1Q49A26 553 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-217ENST00000439669 PDCD4Q53EL6 469 aaKnown RBP21.72■■□□□ 1.07
CPNE1-217ENST00000439669 PLXDC2Q6UX71 529 aa21.72■■□□□ 1.07
CPNE1-217ENST00000439669 MEIOBQ8N635 442 aa21.72■■□□□ 1.07
CPNE1-217ENST00000439669 C9orf106Q8NAJ2 232 aa21.72■■□□□ 1.07
CPNE1-217ENST00000439669 GOT1L1Q8NHS2 421 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-217ENST00000439669 PHOSPHO1Q8TCT1 267 aa21.72■■□□□ 1.07
CPNE1-217ENST00000439669 SMPDL3BQ92485 455 aa21.72■■□□□ 1.07
CPNE1-217ENST00000439669 CCDC115Q96NT0 180 aa21.72■■□□□ 1.07
CPNE1-217ENST00000439669 SLC35A5Q9BS91 424 aa21.72■■□□□ 1.07
CPNE1-217ENST00000439669 SLCO1B3Q9NPD5 702 aa21.72■■□□□ 1.07
CPNE1-217ENST00000439669 BTNL2Q9UIR0 455 aa21.72■■□□□ 1.07
CPNE1-217ENST00000439669 NBPF19A0A087WUL8 3843 aa21.71■■□□□ 1.07
CPNE1-217ENST00000439669 MAST4O15021 2626 aa21.71■■□□□ 1.07
CPNE1-217ENST00000439669 SHISA8B8ZZ34 492 aa21.71■■□□□ 1.07
CPNE1-217ENST00000439669 H3BNH8 94 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms