RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ADAM15Q13444 863 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 KCNC3Q14003 757 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 GRK1Q15835 563 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 ZNF630Q2M218 657 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 ZBTB37Q5TC79 503 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 TCTN3Q6NUS6 607 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 TMEM65Q6PI78 240 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 NDUFAF7Q7L592 441 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 NUDT13Q86X67 352 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 PLCZ1Q86YW0 608 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 OR8J1Q8NGP2 316 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 OR51A7Q8NH64 312 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 SMPDL3AQ92484 453 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 C3orf49Q96BT1 292 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 GABARAPL1Q9H0R8 117 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 C3orf14Q9HBI5 128 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 MRPS30Q9NP92 439 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 DOCK9Q9BZ29 2069 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 EDDM13A0A1B0GTR0 161 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 KHDRBS3O75525 346 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 KAT7O95251 611 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 ELAVL4P26378 380 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 GIPRP48546 466 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 SIM1P81133 766 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 RGS1Q08116 209 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 GPM6BQ13491 265 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 LTB4RQ15722 352 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 SLC25A35Q3KQZ1 300 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 CCNJQ5T5M9 372 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 TEX261Q6UWH6 196 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 ZNF782Q6ZMW2 699 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 ZNF767PQ75MW2 155 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 CEACAM19Q7Z692 300 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 ZER1Q7Z7L7 766 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 CPOQ8IVL8 374 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 RDH10Q8IZV5 341 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 C9orf62Q8N4C0 152 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 OR6T1Q8NGN1 323 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 ST8SIA4Q92187 359 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 TSACCQ96A04 125 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 VWCEQ96DN2 955 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 ZNF582Q96NG8 517 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 RAD9AQ99638 391 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.3□□□□□ -0.922e-6■■□□□ 13.9
CDC42SE1-202ENST00000439374 C1GALT1Q9NS00 363 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 ASIC5Q9NY37 505 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 KLHL21Q9UJP4 597 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 U3KQ87 197 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 CHP2O43745 196 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 RAD1O60671 282 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 EGFP01133 1207 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 GNRH1P01148 92 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 HMGN2P05204 90 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 ANKRD34CP0C6C1 535 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 RHCEP18577 417 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 POLR2CP19387 275 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 M6PRP20645 277 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 PYCR1P32322 319 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 RPS5P46782 204 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 VEGFCP49767 419 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 PER3P56645 1201 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 DEFB134Q4QY38 66 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 C6orf132Q5T0Z8 1188 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 HES5Q5TA89 166 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 ENPP7Q6UWV6 458 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 HDDC2Q7Z4H3 204 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 FGD2Q7Z6J4 655 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 PARGQ86W56 976 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 SIAH3Q8IW03 269 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 MEIOBQ8N635 442 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 NANOGP1Q8N7R0 232 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 SRFBP1Q8NEF9 429 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 ANKK1Q8NFD2 765 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 OR4D9Q8NGE8 314 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 SETD6Q8TBK2 473 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 LCN9Q8WX39 176 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 RGMAQ96B86 450 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 INSM2Q96T92 566 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 TREX2Q9BQ50 279 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 C1QTNF7Q9BXJ2 289 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 ERVMER34-1Q9H9K5 563 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 BRF2Q9HAW0 419 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 OR10H1Q9Y4A9 318 aa9.3□□□□□ -0.92
CDC42SE1-202ENST00000439374 LRRC72A6NJI9 287 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 ZAR1LA6NP61 321 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 H0Y8X5 98 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 NPC1O15118 1278 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 PRG2P13727 222 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 UQCRC2P22695 453 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 PSMA3P25788 255 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 NUP62P37198 522 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 ETV6P41212 452 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 CDK3Q00526 305 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 SLC9A5Q14940 896 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 EIF4HQ15056 248 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 NNATQ16517 81 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 FAM219AQ8IW50 185 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 ZFP82Q8N141 532 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 OR52B4Q8NGK2 314 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 OR8S1Q8NH09 359 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms