RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 GOT1L1Q8NHS2 421 aaPredicted RBP22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 DYDC1Q8WWB3 177 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 C7orf26Q96N11 449 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 TRIB1Q96RU8 372 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 UCK2Q9BZX2 261 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 GPR45Q9Y5Y3 372 aa22.42■■□□□ 1.18
RAPGEF1-206ENST00000438647 A0A1W2PQD3 144 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 AK1P00568 194 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 MATN1P21941 496 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 UQCRC2P22695 453 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 TCEA1P23193 301 aaKnown RBP22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 LHX2P50458 406 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 NME5P56597 212 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 UFM1P61960 85 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 LRRC74AQ0VAA2 488 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 BCL2A1Q16548 175 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 GLYR1Q49A26 553 aaPredicted RBP22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 ZAR1Q86SH2 424 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 SLC35G5Q96KT7 338 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 OR7D2Q96RA2 312 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 SPOCK3Q9BQ16 436 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 PIGQQ9BRB3 760 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 FBXO34Q9NWN3 711 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 ARHGAP21Q5T5U3 1957 aa22.41■■□□□ 1.18
RAPGEF1-206ENST00000438647 MED12Q93074 2177 aa22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 NKX2-6A6NCS4 301 aa22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 TOXO94900 526 aa22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 CPSF4O95639 269 aaKnown RBP22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 PEPDP12955 493 aa22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 CEACAM8P31997 349 aaPredicted RBP22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 PHC1P78364 1004 aa22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 SRYQ05066 204 aa22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 GSTA3Q16772 222 aa22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 SLC9B1Q4ZJI4 515 aa22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 TRIML2Q8N7C3 387 aa22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 TEX37Q96LM6 180 aa22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 ENKD1Q9H0I2 346 aa22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 BTNL2Q9UIR0 455 aa22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 CACNA1DQ01668 2161 aa22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 PKDREJQ9NTG1 2253 aa22.4■■□□□ 1.18
RAPGEF1-206ENST00000438647 MBD3L4A6NDZ8 208 aaPredicted RBP22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 MBD3L3A6NE82 208 aaPredicted RBP22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 MBD3L5A6NJ08 208 aaPredicted RBP22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 H3BNH8 94 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 DVL2O14641 736 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 AGR2O95994 175 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 PGRP06401 933 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 SNRPB2P08579 225 aaKnown RBP22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 ZNF708P17019 499 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 STARP49675 285 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 B3GALT5-AS1P59052 145 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 TFF3Q07654 80 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 FLYWCH1Q4VC44 716 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 PDCD4Q53EL6 469 aaKnown RBP22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 MTERF4Q7Z6M4 381 aaKnown RBP22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 MCEMP1Q8IX19 187 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 TNIP2Q8NFZ5 429 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 OR5D16Q8NGK9 328 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 MBD3L2Q8NHZ7 208 aaPredicted RBP22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 MIPOL1Q8TD10 442 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 CCDC115Q96NT0 180 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 TUBA1CQ9BQE3 449 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 EXD2Q9NVH0 621 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 ZNF629Q9UEG4 869 aaPredicted RBP22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 USH1CQ9Y6N9 552 aa22.39■■□□□ 1.17
RAPGEF1-206ENST00000438647 A0A087WZY1 265 aa22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 DIAPH2O60879 1101 aa22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 POU3F2P20265 443 aaPredicted RBP22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 CLDN18P56856 261 aa22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 RPS26P62854 115 aaKnown RBP22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 PPP2R2AP63151 447 aa22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 MAVSQ7Z434 540 aa22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 GDF7Q7Z4P5 450 aa22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 MEIOBQ8N635 442 aa22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 GATSQ8NAP1 163 aa22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 OR52E6Q96RD3 313 aa22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 UCN2Q96RP3 112 aa22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 INTS9Q9NV88 658 aaKnown RBP22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 STOML1Q9UBI4 398 aa22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 KCNE3Q9Y6H6 103 aa22.38■■□□□ 1.17
RAPGEF1-206ENST00000438647 KDM4EB2RXH2 506 aaPredicted RBP22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 ZNF195O14628 629 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 UBDO15205 165 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 SLC22A3O75751 556 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 TGDSO95455 350 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 IL6P05231 212 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 CHI3L1P36222 383 aaPredicted RBP22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 ATP12AP54707 1039 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 EEFSECP57772 596 aaKnown RBP22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 ATAD3BQ5T9A4 648 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 MEX3BQ6ZN04 569 aaKnown RBP22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 CHMP1BQ7LBR1 199 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 ADGRE4PQ86SQ3 457 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 LIX1LQ8IVB5 337 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 CLEC4FQ8N1N0 589 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 ACBD4Q8NC06 268 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 CHDHQ8NE62 594 aaPredicted RBP22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 LRRC46Q96FV0 321 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 ZFP3Q96NJ6 502 aa22.37■■□□□ 1.17
RAPGEF1-206ENST00000438647 PANX1Q96RD7 426 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms