RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 ECM1Q16610 540 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 NBPF12Q5TAG4 269 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-209ENST00000437951 NDUFAF7Q7L592 441 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 LINC01599Q8WXQ3 324 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 FGGYQ96C11 551 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 L3HYPDHQ96EM0 354 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 ISYNA1Q9NPH2 558 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 THSD1Q9NS62 852 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 B4GALT7Q9UBV7 327 aa10.94□□□□□ -0.66
PTCH1-209ENST00000437951 A0A1W2PPK0 400 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 PPP5D1E7EU14 171 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 AQP9O43315 295 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 CIDEAO60543 219 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 OR2C1O95371 312 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 PNMTP11086 282 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 KCNQ1P51787 676 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 CST9LP1Q5W188 147 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 CD276Q5ZPR3 534 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 ANGPTL6Q8NI99 470 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 PITX2Q99697 317 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 SEMA4GQ9NTN9 838 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 SPP1P10451 314 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 NR0B1P51843 470 aaKnown RBP10.93□□□□□ -0.66
PTCH1-209ENST00000437951 BTG1P62324 171 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 EEF1A2Q05639 463 aaKnown RBP10.93□□□□□ -0.66
PTCH1-209ENST00000437951 GALNT2Q10471 571 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 LAPTM4AQ15012 233 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 OR4E2Q8NGC2 313 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 ASB17Q8WXJ9 295 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 SLC22A7Q9Y694 548 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 ENPP4Q9Y6X5 453 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 LRIT2A6NDA9 550 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 CCL22O00626 93 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 TAAR5O14804 337 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 DAP3P51398 398 aaKnown RBP10.93□□□□□ -0.66
PTCH1-209ENST00000437951 SLC25A11Q02978 314 aaKnown RBP10.93□□□□□ -0.66
PTCH1-209ENST00000437951 VEZF1Q14119 521 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 RBM39Q14498 530 aaKnown RBP10.93□□□□□ -0.66
PTCH1-209ENST00000437951 TIGD3Q6B0B8 471 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 KLHDC8BQ8IXV7 354 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 C1orf127Q8N9H9 656 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 OR52E2Q8NGJ4 325 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 NPLOC4Q8TAT6 608 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 C14orf79Q96F83 325 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 DCCP43146 1447 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 ADGRB1O14514 1584 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 TMEM82A0PJX8 343 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 GJA5P36382 358 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 UBE2G2P60604 165 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 VAMP3Q15836 100 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 AMZ1Q400G9 498 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 RPL22L1Q6P5R6 122 aaKnown RBP10.93□□□□□ -0.66
PTCH1-209ENST00000437951 SBSNQ6UWP8 590 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 ADIPOR2Q86V24 386 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 TMEM156Q8N614 296 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 CLDN22Q8N7P3 220 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 IL17RCQ8NAC3 791 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 OR10Z1Q8NGY1 313 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 ANKRD9Q96BM1 317 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-209ENST00000437951 MYADMQ96S97 322 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 STRADBQ9C0K7 418 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 GJD2Q9UKL4 321 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 PCM1Q15154 2024 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 KIAA0141Q14154 515 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-209ENST00000437951 MEP1BQ16820 701 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 SERPINA11Q86U17 422 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 SPRYD4Q8WW59 207 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-209ENST00000437951 EMID1Q96A84 441 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-209ENST00000437951 SAP130Q9H0E3 1048 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 SOX17Q9H6I2 414 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-209ENST00000437951 GORASP2Q9H8Y8 452 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 PRDM9Q9NQV7 894 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 HES2Q9Y543 173 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 A3GALT2U3KPV4 340 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 DVL2O14641 736 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 SHMT2P34897 504 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 MGAT3Q09327 533 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 LYRM7Q5U5X0 104 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 MANEALQ5VSG8 457 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 VITQ6UXI7 678 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 APOOLQ6UXV4 268 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 LIX1LQ8IVB5 337 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 METTL17Q9H7H0 456 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-209ENST00000437951 POLHQ9Y253 713 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 KIF1AQ12756 1690 aa10.93□□□□□ -0.66
PTCH1-209ENST00000437951 EDDM13A0A1B0GTR0 161 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 CACNG3O60359 315 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 CNR2P34972 360 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 ETV3P41162 512 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 ACY1Q03154 408 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 AAK1Q2M2I8 961 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 HEPHL1Q6MZM0 1159 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 OR52N2Q8NGI0 321 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 OR13C4Q8NGS5 318 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 GPR88Q9GZN0 384 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 MAP1BP46821 2468 aaKnown RBP10.92□□□□□ -0.66
PTCH1-209ENST00000437951 VSTM2BA6NLU5 285 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 SURF4O15260 269 aa10.92□□□□□ -0.66
PTCH1-209ENST00000437951 RPS19P39019 145 aaKnown RBP10.92□□□□□ -0.66
PTCH1-209ENST00000437951 RAB11AP62491 216 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms