RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 CROCCP3Q8IVE0 287 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 MORN4Q8NDC4 146 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 HSPBAP1Q96EW2 488 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 CTRCQ99895 268 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 FTSJ1Q9UET6 329 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 TCRBV16S1A1N1A0A5B0 115 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 CDHR4A6H8M9 788 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 D6RAR5 112 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 AP3D1O14617 1153 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 CYP7B1O75881 506 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 SOX14O95416 240 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 GALNSP34059 522 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 SLC37A1P57057 533 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 GABARAPL2P60520 117 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 ENTHD1Q8IYW4 607 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 ZSCAN1Q8NBB4 408 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 MESP1Q9BRJ9 268 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 Q9N2J8 555 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 MKKSQ9NPJ1 570 aaPredicted RBP19.54■□□□□ 0.72
PTPRF-207ENST00000436724 OR10H1Q9Y4A9 318 aa19.54■□□□□ 0.72
PTPRF-207ENST00000436724 LNP1A1A4G5 178 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 M0R129 80 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 SLC1A7O00341 560 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 OXSR1O95747 527 aaPredicted RBP19.53■□□□□ 0.72
PTPRF-207ENST00000436724 ANGPTL1O95841 491 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 ADAP00813 363 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 ZNF182P17025 639 aaPredicted RBP19.53■□□□□ 0.72
PTPRF-207ENST00000436724 PTNP21246 168 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 POU1F1P28069 291 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 IDH2P48735 452 aaKnown RBP19.53■□□□□ 0.72
PTPRF-207ENST00000436724 BIKQ13323 160 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 MAD2L1BPQ15013 274 aaPredicted RBP19.53■□□□□ 0.72
PTPRF-207ENST00000436724 PTGES3Q15185 160 aaKnown RBP19.53■□□□□ 0.72
PTPRF-207ENST00000436724 LANCL3Q6ZV70 420 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 PLEKHM3Q6ZWE6 761 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 ZER1Q7Z7L7 766 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 PARP8Q8N3A8 854 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 PHOX2BQ99453 314 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 GPA33Q99795 319 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 REV1Q9UBZ9 1251 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 A0A087WUU8 490 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 KHNYNO15037 678 aaKnown RBP19.53■□□□□ 0.72
PTPRF-207ENST00000436724 INHBBP09529 407 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 CCNA2P20248 432 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 MMP11P24347 488 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 CHMP24386 653 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 DUSP3P51452 185 aaPredicted RBP19.53■□□□□ 0.72
PTPRF-207ENST00000436724 TOP3AQ13472 1001 aaPredicted RBP19.53■□□□□ 0.72
PTPRF-207ENST00000436724 EIPR1Q53HC9 387 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 NKAIN4Q8IVV8 208 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 STT3BQ8TCJ2 826 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 SLC2A12Q8TD20 617 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 PAK1IP1Q9NWT1 392 aaPredicted RBP19.53■□□□□ 0.72
PTPRF-207ENST00000436724 CBLCQ9ULV8 474 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 MGAT4BQ9UQ53 548 aa19.53■□□□□ 0.72
PTPRF-207ENST00000436724 PTGES3LE9PB15 166 aa19.52■□□□□ 0.72
PTPRF-207ENST00000436724 NTN3O00634 580 aaPredicted RBP19.52■□□□□ 0.72
PTPRF-207ENST00000436724 DDAH2O95865 285 aa19.52■□□□□ 0.72
PTPRF-207ENST00000436724 GGT2P36268 569 aa19.52■□□□□ 0.72
PTPRF-207ENST00000436724 NKAIN1Q4KMZ8 207 aa19.52■□□□□ 0.72
PTPRF-207ENST00000436724 BCORP1Q8N888 145 aa19.52■□□□□ 0.72
PTPRF-207ENST00000436724 FNDC8Q8TC99 324 aa19.52■□□□□ 0.72
PTPRF-207ENST00000436724 RHNO1Q9BSD3 238 aa19.52■□□□□ 0.72
PTPRF-207ENST00000436724 UCK2Q9BZX2 261 aa19.52■□□□□ 0.72
PTPRF-207ENST00000436724 POLE3Q9NRF9 147 aa19.52■□□□□ 0.72
PTPRF-207ENST00000436724 RNF6Q9Y252 685 aa19.52■□□□□ 0.72
PTPRF-207ENST00000436724 IGKV3-11P04433 115 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 HTR2AP28223 471 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 UGT2B15P54855 530 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 ELAVL1Q15717 326 aaKnown RBP19.51■□□□□ 0.71
PTPRF-207ENST00000436724 ANKDD1AQ495B1 522 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 ZNF721Q8TF20 911 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 APH1BQ8WW43 257 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 CNOT9Q92600 299 aaKnown RBP19.51■□□□□ 0.71
PTPRF-207ENST00000436724 FKBP10Q96AY3 582 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 GPN2Q9H9Y4 310 aaPredicted RBP19.51■□□□□ 0.71
PTPRF-207ENST00000436724 HSPE1-MOB4S4R3N1 261 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 FAM86C2PA6NEL3 165 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 NOL3O60936 208 aaKnown RBP19.51■□□□□ 0.71
PTPRF-207ENST00000436724 WBP4O75554 376 aaKnown RBP19.51■□□□□ 0.71
PTPRF-207ENST00000436724 ST3GAL3Q11203 375 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 GDF7Q7Z4P5 450 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 PPP1R3BQ86XI6 285 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 OR7G1Q8NGA0 311 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 EFHD2Q96C19 240 aaPredicted RBP19.51■□□□□ 0.71
PTPRF-207ENST00000436724 SLC41A3Q96GZ6 507 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 PRODH2Q9UF12 536 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 BLOC1S6Q9UL45 172 aa19.51■□□□□ 0.71
PTPRF-207ENST00000436724 EFCAB7A8K855 629 aa19.5■□□□□ 0.71
PTPRF-207ENST00000436724 SOX30O94993 753 aa19.5■□□□□ 0.71
PTPRF-207ENST00000436724 ZGLP1P0C6A0 271 aa19.5■□□□□ 0.71
PTPRF-207ENST00000436724 PCMT1P22061 227 aa19.5■□□□□ 0.71
PTPRF-207ENST00000436724 GRK6P43250 576 aa19.5■□□□□ 0.71
PTPRF-207ENST00000436724 CRISP1P54107 249 aa19.5■□□□□ 0.71
PTPRF-207ENST00000436724 TRAM2Q15035 370 aa19.5■□□□□ 0.71
PTPRF-207ENST00000436724 BMP8AQ7Z5Y6 402 aa19.5■□□□□ 0.71
PTPRF-207ENST00000436724 OR4C3Q8NH37 302 aa19.5■□□□□ 0.71
PTPRF-207ENST00000436724 RHBDD1Q8TEB9 315 aa19.5■□□□□ 0.71
PTPRF-207ENST00000436724 RAB2BQ8WUD1 216 aa19.5■□□□□ 0.71
PTPRF-207ENST00000436724 SLC38A4Q969I6 547 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms