RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 GPR4P46093 362 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 NRLP54845 237 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 GALEQ14376 348 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 C11orf49Q9H6J7 331 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 C1orf123Q9NWV4 160 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 ANHXE9PGG2 379 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 MSX1P28360 303 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 STEAP4Q687X5 459 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 SUSD1Q6UWL2 747 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 SBSNQ6UWP8 590 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 RABEPKQ7Z6M1 372 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 OR5T1Q8NG75 326 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 SMOXQ9NWM0 555 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 PCDHGA5Q9Y5G8 931 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 MYOM1P52179 1685 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 E7ESA3 106 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 KIAA0355O15063 1070 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 CA5AP35218 305 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 ASRGL1Q7L266 308 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 FAM109AQ8N4B1 249 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 B3GNT7Q8NFL0 401 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 MYH14Q7Z406 1995 aaKnown RBP13.67□□□□□ -0.22
PTPN13-203ENST00000427191 A8MU76 341 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 MAN2B1O00754 1011 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 KCNK2O95069 426 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 HNRNPA1P09651 372 aaKnown RBP eCLIP13.67□□□□□ -0.22
PTPN13-203ENST00000427191 HAPLN1P10915 354 aaPredicted RBP13.67□□□□□ -0.22
PTPN13-203ENST00000427191 UHRF1Q96T88 793 aaPredicted RBP13.67□□□□□ -0.22
PTPN13-203ENST00000427191 NMNAT2Q9BZQ4 307 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 CNTRLQ7Z7A1 2325 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 SCGB1D1O95968 90 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 KNG1P01042 644 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 NUDT1P36639 197 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 OGDHQ02218 1023 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 UMODL1-AS1Q8N2C9 162 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 SERINC2Q96SA4 455 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 FEVQ99581 238 aa13.67□□□□□ -0.22
PTPN13-203ENST00000427191 CCDC88CQ9P219 2028 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 PEX10O60683 326 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 IL1AP01583 271 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 LCKP06239 509 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 BMP4P12644 408 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 PPP3CBP16298 524 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 NFYBP25208 207 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 RAB35Q15286 201 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 CYP27C1Q4G0S4 372 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 PLBD1Q6P4A8 553 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 CLDN19Q8N6F1 224 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 CDRT4Q8N9R6 151 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 SGCZQ96LD1 299 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 BTNL2Q9UIR0 455 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 DVL2O14641 736 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 ZNF780AO75290 641 aaPredicted RBP13.66□□□□□ -0.22
PTPN13-203ENST00000427191 POLR2CP19387 275 aaPredicted RBP13.66□□□□□ -0.22
PTPN13-203ENST00000427191 LRP8Q14114 963 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 PTPRCAPQ14761 206 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 RBMS2Q15434 407 aaKnown RBP13.66□□□□□ -0.22
PTPN13-203ENST00000427191 KCNJ8Q15842 424 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 SPRYD7Q5W111 196 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 Q8N9G6 341 aaPredicted RBP13.66□□□□□ -0.22
PTPN13-203ENST00000427191 OR6F1Q8NGZ6 308 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 CLEC4DQ8WXI8 215 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 KCNK6Q9Y257 313 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 ANKRD34BA5PLL1 514 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 ACVRL1P37023 503 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 AAK1Q2M2I8 961 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 HUS1BQ8NHY5 278 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 TTTY10Q9BZA0 68 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 TUBB1Q9H4B7 451 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 OR9K2Q8NGE7 335 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 VRTNQ9H8Y1 702 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 ZNF160Q9HCG1 818 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 TESQ9UGI8 421 aaKnown RBP13.66□□□□□ -0.22
PTPN13-203ENST00000427191 GPR34Q9UPC5 381 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 SLC22A23A1A5C7 686 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 TRA2BP62995 288 aaKnown RBP13.66□□□□□ -0.22
PTPN13-203ENST00000427191 KLHDC8BQ8IXV7 354 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 INTS14Q96SY0 518 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 MYOTQ9UBF9 498 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 NUDT19A8MXV4 375 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 BCKDHBP21953 392 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 RAB11AP62491 216 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 PPP1R8Q12972 351 aaKnown RBP13.66□□□□□ -0.22
PTPN13-203ENST00000427191 LFNGQ8NES3 379 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 OR1E3Q8WZA6 343 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 EBF1Q9UH73 591 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 MRC1P22897 1456 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 H7C1Q1 480 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 ARVCFO00192 962 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 RPL17P18621 184 aaKnown RBP13.66□□□□□ -0.22
PTPN13-203ENST00000427191 IMPA1P29218 277 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 F2RL1P55085 397 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 FOXJ1Q92949 421 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 SLC22A11Q9NSA0 550 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 HIF1ANQ9NWT6 349 aa13.66□□□□□ -0.22
PTPN13-203ENST00000427191 TMX2-CTNND1H3BSU7 103 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 K7EQM0 130 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 S1PR4O95977 384 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 FDXRP22570 491 aa13.65□□□□□ -0.22
PTPN13-203ENST00000427191 RABIFP47224 123 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms