RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 EMBQ6PCB8 327 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 FIGNL1Q6PIW4 674 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 PAMR1Q6UXH9 720 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 COX18Q8N8Q8 333 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 OR7A2PQ8NGA2 310 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 FBXO30Q8TB52 745 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 AGR3Q8TD06 166 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 AENQ8WTP8 325 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 SMPDL3BQ92485 455 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 MBD6Q96DN6 1003 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 FAM120BQ96EK7 910 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 PGM2Q96G03 612 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 C16orf58Q96GQ5 468 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 UBQLN4Q9NRR5 601 aa15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 ZCCHC3Q9NUD5 404 aaKnown RBP15.84■□□□□ 0.13
PDLIM2-208ENST00000416159 CELSR1Q9NYQ6 3014 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 GMFGO60234 142 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 SOX30O94993 753 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 SLU7O95391 586 aaKnown RBP15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 RAF1P04049 648 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 HRGP04196 525 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 FCGR2AP12318 317 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 CD99P14209 185 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 ZNF17P17021 662 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 EFNA1P20827 205 aaPredicted RBP15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 CD79BP40259 229 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 KIR2DL2P43627 348 aaPredicted RBP15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 POU6F2P78424 691 aaPredicted RBP15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 PON3Q15166 354 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 SGCBQ16585 318 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 C6orf136Q5SQH8 315 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 CPTPQ5TA50 214 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 BTLAQ7Z6A9 289 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 GALNT10Q86SR1 603 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 TGIF2LYQ8IUE0 185 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 MISPQ8IVT2 679 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 FNDC9Q8TBE3 224 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 OR5P2Q8WZ92 322 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 JADE3Q92613 823 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 ZNF845Q96IR2 970 aaPredicted RBP15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 ALPK1Q96QP1 1244 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 STACQ99469 402 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 PRPF18Q99633 342 aaKnown RBP15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 TMEM109Q9BVC6 243 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 TMUB1Q9BVT8 246 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 BTBD2Q9BX70 525 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 PLEKHF2Q9H8W4 249 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 RNF122Q9H9V4 155 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 DUSP22Q9NRW4 184 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 SIRT3Q9NTG7 399 aaPredicted RBP15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 ATAD3AQ9NVI7 634 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 GIN1Q9NXP7 522 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 ELOVL5Q9NYP7 299 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 GIMAP2Q9UG22 337 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 ZDHHC2Q9UIJ5 367 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 VDAC3Q9Y277 283 aa15.83■□□□□ 0.12
PDLIM2-208ENST00000416159 A0A1W2PQD3 144 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 SCDO00767 359 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 BPGMP07738 259 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 LAMP1P11279 417 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 CPOXP36551 454 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 SIRPAP78324 504 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 FAM27E3Q08E93 113 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 KEAP1Q14145 624 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 LSM12Q3MHD2 195 aaKnown RBP15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 IL23RQ5VWK5 629 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 WDR93Q6P2C0 686 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 ZAR1Q86SH2 424 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 WDR75Q8IWA0 830 aaKnown RBP15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 GTPBP8Q8N3Z3 284 aaPredicted RBP15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 GATSQ8NAP1 163 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 FNDC5Q8NAU1 212 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 ACTRT2Q8TDY3 377 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 CAVIN3Q969G5 261 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 ZBTB8AQ96BR9 441 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 CHMP6Q96FZ7 201 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 C3orf30Q96M34 536 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 SLC39A3Q9BRY0 314 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 PIGUQ9H490 435 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 FBXO34Q9NWN3 711 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 PAQR5Q9NXK6 330 aaPredicted RBP15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 EIF3LQ9Y262 564 aaKnown RBP15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 TESMINQ9Y4I5 508 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 SNX8Q9Y5X2 465 aa15.82■□□□□ 0.12
PDLIM2-208ENST00000416159 SHISA8B8ZZ34 492 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 TYROBPO43914 113 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 ATE1O95260 518 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 HMGN2P05204 90 aaKnown RBP15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 KRT16P08779 473 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 CD8BP10966 210 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 CREB1P16220 341 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 ARRB2P32121 409 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 CCT3P49368 545 aaKnown RBP15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 ZNF41P51814 821 aaPredicted RBP15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 PPP2R2AP63151 447 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 MAD2L1Q13257 205 aaPredicted RBP15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 LASP1Q14847 261 aaKnown RBP15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 CCNJQ5T5M9 372 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 CDC73Q6P1J9 531 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 ZNF474Q6S9Z5 364 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms