RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 FAAP20Q6NZ36 180 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 GPRIN3Q6ZVF9 776 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 C16orf62Q7Z3J2 963 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 PHC2Q8IXK0 858 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 TMEM123Q8N131 208 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 Q8N377 158 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 SYT14Q8NB59 555 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 OR2T33Q8NG76 320 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 ITLN1Q8WWA0 313 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 SH3YL1Q96HL8 342 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 C9orf85Q96MD7 179 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZBTB18Q99592 522 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 SLC6A7Q99884 636 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 NXF5Q9H1B4 397 aaKnown RBP3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 FAM120CQ9NX05 1096 aaKnown RBP3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 ARMCX1Q9P291 453 aa3.81□□□□□ -1.8
HMGB3P31-201ENST00000413333 USP6P35125 1406 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 EFCAB7A8K855 629 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 G3V3Y1 287 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 FCN1O00602 326 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 CXCL11O14625 94 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 PRRG1O14668 218 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 ARPC3O15145 178 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 GALR3O60755 368 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 RAMP1O60894 148 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 TRIM3O75382 744 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 ALOX5P09917 674 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 UMPSP11172 480 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZNF44P15621 663 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 PCMT1P22061 227 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 PTBP1P26599 531 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 HMGCS2P54868 508 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 OTUD4Q01804 1114 aaKnown RBP3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 MXD4Q14582 209 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 PDK3Q15120 406 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 CYP51A1Q16850 503 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 MICAQ29983 383 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 RABL6Q3YEC7 729 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZNF57Q68EA5 555 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 STAC2Q6ZMT1 411 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 IFNEQ86WN2 208 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 MCOLN2Q8IZK6 566 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 LINC01561Q8N1V8 128 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 CLDN19Q8N6F1 224 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 OR6T1Q8NGN1 323 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 TRUB1Q8WWH5 349 aaKnown RBP3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 FAM3CQ92520 227 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 NR4A3Q92570 626 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZNF689Q96CS4 500 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 C12orf66Q96MD2 445 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 AMDHD1Q96NU7 426 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 MCCC1Q96RQ3 725 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 SECISBP2Q96T21 854 aaKnown RBP3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 NPAS2Q99743 824 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 GCOM2Q9BZD3 368 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 APMAPQ9HDC9 416 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 EXOSC3Q9NQT5 275 aaKnown RBP3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 DHRS4-AS1Q9P1J3 65 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 SLC2A6Q9UGQ3 507 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 RPH3ALQ9UNE2 315 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 ASB3Q9Y575 518 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 ALG6Q9Y672 507 aa3.8□□□□□ -1.8
HMGB3P31-201ENST00000413333 SAGE2PA6NJ88 616 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 E9PAM4 449 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 UBXN8O00124 270 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 SAP18O00422 153 aaKnown RBP3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 GPRIN2O60269 458 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 PALMO75781 387 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 VENTXO95231 258 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 RENP00797 406 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 CA1P00915 261 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 TPSB2P20231 275 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 TBXA2RP21731 343 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 CALB2P22676 271 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 RPL8P62917 257 aaKnown RBP3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 TNFRSF17Q02223 184 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 TPSAB1Q15661 275 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 LTB4RQ15722 352 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 MRGPRG-AS1Q2M3A8 158 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 GLIPR1L2Q4G1C9 344 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 TEX44Q53QW1 395 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 BOLA3Q53S33 107 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 DCST2Q5T1A1 773 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZSCAN25Q6NSZ9 544 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 APTXQ7Z2E3 356 aaKnown RBP3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 SLC47A2Q86VL8 602 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 HIPK1Q86Z02 1210 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 VSTM4Q8IW00 320 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZNF440Q8IYI8 595 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 CSNK1G2-AS1Q8NCQ2 148 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 EMG1Q92979 244 aaKnown RBP3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZBED6CLQ96FA7 236 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 NAP1L5Q96NT1 182 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 TGM7Q96PF1 710 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 SOSTQ9BQB4 213 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 HCAR1Q9BXC0 346 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 DUSP16Q9BY84 665 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 ZBP1Q9H171 429 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 GNB4Q9HAV0 340 aa3.79□□□□□ -1.8
HMGB3P31-201ENST00000413333 SLCO1B1Q9Y6L6 691 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms