RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 GAL3ST4Q96RP7 486 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 SCN11AQ9UI33 1791 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 AK1P00568 194 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 ADRB1P08588 477 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 IQCF3P0C7M6 154 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 CLDN20P56880 219 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 SLC5A12Q1EHB4 618 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 ITPRIPL2Q3MIP1 535 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 GGTA1PQ4G0N0 100 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 SRRQ9GZT4 340 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 LTB4R2Q9NPC1 389 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 NIT2Q9NQR4 276 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 FBXL2Q9UKC9 423 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 YIPF1Q9Y548 306 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 PDE4DIPQ5VU43 2346 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 MYH9P35579 1960 aaKnown RBP16.67■□□□□ 0.26
SMPD4-202ENST00000409031 CHD4Q14839 1912 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 PHYHO14832 338 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 PTPRRQ15256 657 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 TMEM35AQ53FP2 167 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 IER5LQ5T953 404 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 VRK1Q99986 396 aaPredicted RBP16.67■□□□□ 0.26
SMPD4-202ENST00000409031 C16orf70Q9BSU1 422 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 GABARAPL3Q9BY60 117 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 SPNS1Q9H2V7 528 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 CLEC2DQ9UHP7 191 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 TRBV4-1A0A0J9YWV2 114 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 CSF3P09919 207 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 EXOSC2Q13868 293 aaKnown RBP16.67■□□□□ 0.26
SMPD4-202ENST00000409031 CHRFAM7AQ494W8 412 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 MEPCEQ7L2J0 689 aaKnown RBP16.67■□□□□ 0.26
SMPD4-202ENST00000409031 PRRT1Q99946 306 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 ASIC5Q9NY37 505 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 CLEC4EQ9ULY5 219 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 GPR39O43194 453 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 EGFP01133 1207 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 STATHP02808 62 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 MTHFD2P13995 350 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 HBA1P69905 142 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 NKX3-2P78367 333 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 ILF3Q12906 894 aaKnown RBP eCLIP16.66■□□□□ 0.268e-7■■■□□ 15
SMPD4-202ENST00000409031 LRIF1Q5T3J3 769 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 TMEM107Q6UX40 140 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 FOXRED1Q96CU9 486 aaPredicted RBP16.66■□□□□ 0.26
SMPD4-202ENST00000409031 C4orf36Q96KX1 117 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 ZNF582Q96NG8 517 aaPredicted RBP16.66■□□□□ 0.26
SMPD4-202ENST00000409031 C1QTNF2Q9BXJ5 285 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 PIGMQ9H3S5 423 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 ACTL8Q9H568 366 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 RAB19A4D1S5 217 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 TRABD2BA6NFA1 517 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 GPRIN2O60269 458 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 FADS1O60427 444 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 ZNF254O75437 659 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 TSPAN31Q12999 210 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 AMZ1Q400G9 498 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 UBE2NLQ5JXB2 153 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 MARC2Q969Z3 335 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 DDOQ99489 341 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 MICU1Q9BPX6 476 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 SLAMF7Q9NQ25 335 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 SNRNP70P08621 437 aaKnown RBP16.66■□□□□ 0.26
SMPD4-202ENST00000409031 MASP1P48740 699 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 VEGFCP49767 419 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 TOMM20Q15388 145 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 AANATQ16613 207 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 KIAA1324Q6UXG2 1013 aaKnown RBP16.66■□□□□ 0.26
SMPD4-202ENST00000409031 SSX9Q7RTT3 188 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 KANSL1Q7Z3B3 1105 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 BPHLQ86WA6 291 aaPredicted RBP16.66■□□□□ 0.26
SMPD4-202ENST00000409031 KHSRPQ92945 711 aaKnown RBP eCLIP16.66■□□□□ 0.26
SMPD4-202ENST00000409031 SRA1Q9HD15 236 aaKnown RBP16.66■□□□□ 0.26
SMPD4-202ENST00000409031 PLAGL1Q9UM63 463 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 CA5BQ9Y2D0 317 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 LAMB4A4D0S4 1761 aa16.66■□□□□ 0.26
SMPD4-202ENST00000409031 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 SCDO00767 359 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 NFATC1O95644 943 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 IFNA10P01566 189 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 IFNA4P05014 189 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 CCR9P51686 369 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 HERV-K104P61576 105 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 CBFBQ13951 182 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 MEF2DQ14814 521 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 NLGN4XQ8N0W4 816 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 CYB561A3Q8NBI2 242 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 OR52I1Q8NGK6 324 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 NKX6-2Q9C056 277 aaPredicted RBP16.65■□□□□ 0.26
SMPD4-202ENST00000409031 HMX1Q9NP08 348 aaPredicted RBP16.65■□□□□ 0.26
SMPD4-202ENST00000409031 P2RX6O15547 441 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 CXCL14O95715 111 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 SELPP16109 830 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 LUMP51884 338 aaPredicted RBP16.65■□□□□ 0.26
SMPD4-202ENST00000409031 C18orf63Q68DL7 685 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 GPR155Q7Z3F1 870 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 MFSD6LQ8IWD5 586 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 OR4M1Q8NGD0 313 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 OLIG1Q8TAK6 271 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 GPR148Q8TDV2 347 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 MYLIPQ8WY64 445 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms