RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 PNOCQ13519 176 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 PDK4Q16654 411 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 BEND6Q5SZJ8 279 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 LEG1Q6P5S2 330 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 CBLN3Q6UW01 205 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 ATRAIDQ6UW56 229 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 ERASQ7Z444 233 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 CUZD1Q86UP6 607 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZDHHC21Q8IVQ6 265 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 EFCAB13Q8IY85 973 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZNF781Q8N8C0 355 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 SAMD12Q8N8I0 201 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 OR5AU1Q8NGC0 362 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 OR4F5Q8NH21 305 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZNF606Q8WXB4 792 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 RLN3Q8WXF3 142 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 DYNLL2Q96FJ2 89 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 RBM18Q96H35 190 aaKnown RBP3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 RCHY1Q96PM5 261 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 APOOQ9BUR5 198 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 GPR174Q9BXC1 333 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 RAB33BQ9H082 229 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 PARLQ9H300 379 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 ALG9Q9H6U8 611 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 NT5DC2Q9H857 520 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 NRN1Q9NPD7 142 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 GPR83Q9NYM4 423 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 COX16Q9P0S2 106 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 GHRLQ9UBU3 117 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZNF580Q9UK33 172 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 MGAT4AQ9UM21 535 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 B9D1Q9UPM9 204 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 KLHDC2Q9Y2U9 406 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 AUP1Q9Y679 476 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 ANKRD36CQ5JPF3 1778 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 IGHV4-30-2A0A087WSY4 118 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 G3V2L1 256 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 DYNC1I1O14576 645 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 POLR2DO15514 142 aaKnown RBP3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 SDC3O75056 442 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 UFL1O94874 794 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 SMC2O95347 1197 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 OPN1MWP04001 364 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 GSTT2P0CG29 244 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 GSTT2BP0CG30 244 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 OPN1MW2P0DN77 364 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 OPN1MW3P0DN78 364 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 FOSL2P15408 326 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 CYP11B1P15538 503 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 H2AFXP16104 143 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 TSPAN8P19075 237 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 BTDP43251 543 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 ACADVLP49748 655 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 PGFP49763 221 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 RIDAP52758 137 aaKnown RBP3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 FKBP3Q00688 224 aaKnown RBP3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 SPIBQ01892 262 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 MYL5Q02045 173 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 EIF2B1Q14232 305 aaKnown RBP3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 RFTN1Q14699 578 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 UNC50Q53HI1 259 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 SPATA46Q5T0L3 261 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 NCR3LG1Q68D85 454 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 NUFIP2Q7Z417 695 aaKnown RBP3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 TSEN54Q7Z6J9 526 aaKnown RBP3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 LRRTM1Q86UE6 522 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 KCNMB4Q86W47 210 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 CARM1Q86X55 608 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 C4orf32Q8N8J7 132 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 RELL2Q8NC24 303 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 NFAM1Q8NET5 270 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 OR1B1Q8NGR6 318 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 SLC5A11Q8WWX8 675 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 DLX4Q92988 240 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 PAGE5Q96GU1 130 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 ELMO2Q96JJ3 720 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 ART5Q96L15 291 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 LITAFQ99732 161 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 LZTS2Q9BRK4 669 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 TRIM51Q9BSJ1 452 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 CABLES2Q9BTV7 478 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZNF696Q9H7X3 374 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 PALMDQ9NP74 551 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZDHHC18Q9NUE0 388 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 C1orf123Q9NWV4 160 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 IFNKQ9P0W0 207 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 GALPQ9UBC7 116 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 CACNG5Q9UF02 275 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 RARRES3Q9UL19 164 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 EIF3LQ9Y262 564 aaKnown RBP3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 AP4B1Q9Y6B7 739 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 TIAM2Q8IVF5 1701 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 ROBO3Q96MS0 1386 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 NUP98P52948 1817 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 AKAP11Q9UKA4 1901 aa3.97□□□□□ -1.77
HMGB3P18-201ENST00000406327 DDX60Q8IY21 1712 aaKnown RBP3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 ARAP2Q8WZ64 1704 aa3.96□□□□□ -1.78
HMGB3P18-201ENST00000406327 WNK3Q9BYP7 1800 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms