RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 APOBEC4Q8WW27 367 aaKnown RBP15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 ZBED6CLQ96FA7 236 aaPredicted RBP15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 TCEAL7Q9BRU2 100 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 PPP1R3EQ9H7J1 279 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 EVA1AQ9H8M9 152 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 NLKQ9UBE8 527 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 COMMD3Q9UBI1 195 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 ZNF222Q9UK12 451 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 LYRM1O43325 122 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 PLOD3O60568 738 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 MED6O75586 246 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 CATP04040 527 aaKnown RBP15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 PTBP1P26599 531 aaKnown RBP eCLIP15.19■□□□□ 0.026e-6■■■■□ 21.7
COL4A3BP-204ENST00000405807 SMIM11AP58511 58 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 MADCAM1Q13477 382 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 FCN2Q15485 313 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 SLC25A30Q5SVS4 291 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 MFSD14CQ5VZR4 134 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 ELP2Q6IA86 826 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 TMIGD1Q6UXZ0 262 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 TGIF2LXQ8IUE1 241 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 TMEM163Q8TC26 289 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 POF1BQ8WVV4 589 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 UPRTQ96BW1 309 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 MTERF3Q96E29 417 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 SOSTQ9BQB4 213 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 POLDIP3Q9BY77 421 aaKnown RBP15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 NLNQ9BYT8 704 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 CA14Q9ULX7 337 aa15.19■□□□□ 0.02
COL4A3BP-204ENST00000405807 SLC43A1O75387 559 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 CKBP12277 381 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 GJA1P17302 382 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 DGKGP49619 791 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 CLDN20P56880 219 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 SNRPD1P62314 119 aaKnown RBP15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 UBE2IP63279 158 aaKnown RBP15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 C3orf38Q5JPI3 329 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 FAM71E1Q6IPT2 247 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 TCTN3Q6NUS6 607 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 ZCCHC12Q6PEW1 402 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 CNIH2Q6PI25 160 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 PRSS58Q8IYP2 241 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 PLA2G15Q8NCC3 412 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 OR56A3Q8NH54 315 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 OR52P1PQ8NH57 321 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 MYNNQ9NPC7 610 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 TESQ9UGI8 421 aaKnown RBP15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 CD84Q9UIB8 345 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 ACOD1A6NK06 481 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 FOXE1O00358 373 aaPredicted RBP15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 CHP2O43745 196 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 UQCRC2P22695 453 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 OR1D2P34982 312 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 RGS19P49795 217 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 TAS2R50P59544 299 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 RPS25P62851 125 aaKnown RBP15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 TPBGQ13641 420 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 SPDYE7PQ495Y7 208 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 LIPNQ5VXI9 398 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 PGBD2Q6P3X8 592 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 SLCO4C1Q6ZQN7 724 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 MARVELD1Q9BSK0 173 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 ISYNA1Q9NPH2 558 aa15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 PPIEQ9UNP9 301 aaKnown RBP15.18■□□□□ 0.02
COL4A3BP-204ENST00000405807 SMIM30A4D0T7 59 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 MARCH11A6NNE9 402 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 SLC16A8O95907 504 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 HCKP08631 526 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 NMBP08949 121 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 INPP1P49441 399 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 FKBP1BP68106 108 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 SYT14P1Q58G82 188 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 QSOX2Q6ZRP7 698 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 TMPRSS11BQ86T26 416 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 NEIL2Q969S2 332 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 ECHDC3Q96DC8 303 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 GPR160Q9UJ42 338 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 PCDHB10Q9UN67 800 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 IRGMA1A4Y4 181 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 E9PI62 339 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 CASKO14936 926 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 PRKYO43930 277 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 BNIP3LO60238 219 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 UBXN7O94888 489 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 FAM157BP0CG42 384 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 IMPA1P29218 277 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 CARD18P57730 90 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 TNFRSF17Q02223 184 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 SF3A2Q15428 464 aaKnown RBP15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 SNAPC1Q16533 368 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 SYTL3Q4VX76 610 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 KRBOX4Q5JUW0 171 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 SAPCD1Q5SSQ6 148 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 SLC8B1Q6J4K2 584 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 ARRDC1Q8N5I2 433 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 ZNF655Q8N720 491 aaPredicted RBP15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 DMBX1Q8NFW5 382 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 OR10J5Q8NHC4 309 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 MS4A3Q96HJ5 214 aa15.17■□□□□ 0.02
COL4A3BP-204ENST00000405807 LRR1Q96L50 414 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms