RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 LCN1P31025 176 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 RBBP4Q09028 425 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 FOXO1Q12778 655 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 NFATC3Q12968 1075 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 SNTA1Q13424 505 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 ZNF141Q15928 474 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 ZNF630Q2M218 657 aaPredicted RBP14.58□□□□□ -0.08
HMGA1-204ENST00000401473 PDZK1Q5T2W1 519 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 OR5M10Q6IEU7 315 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.58□□□□□ -0.08
HMGA1-204ENST00000401473 FAM156AQ8NDB6 213 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 OR2T12Q8NG77 320 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 FRMD6Q96NE9 622 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 POLE3Q9NRF9 147 aa14.58□□□□□ -0.08
HMGA1-204ENST00000401473 A0A0G2JPF8 293 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 TMEM247A6NEH6 219 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 PRAMEF25A6NGN4 478 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 AGAP5A6NIR3 686 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 HNRNPCL2B2RXH8 293 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 HNRNPCL3B7ZW38 293 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 EBAG9O00559 213 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 PEX1O43933 1283 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 HNRNPCL1O60812 293 aaKnown RBP14.57□□□□□ -0.08
HMGA1-204ENST00000401473 SORBS2O94875 1100 aaKnown RBP14.57□□□□□ -0.08
HMGA1-204ENST00000401473 HNRNPCL4P0DMR1 293 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 CRYBA2P53672 197 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 PCBP3P57721 371 aaKnown RBP14.57□□□□□ -0.08
HMGA1-204ENST00000401473 EEFSECP57772 596 aaKnown RBP14.57□□□□□ -0.08
HMGA1-204ENST00000401473 CEACAM7Q14002 265 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 CD226Q15762 336 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 METTL25Q8N6Q8 603 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 WDSUB1Q8N9V3 476 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 TEX19Q8NA77 164 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 GATSQ8NAP1 163 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 OR2M7Q8NG81 312 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 DUSP19Q8WTR2 217 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 PNPLA2Q96AD5 504 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 C5orf34Q96MH7 638 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 DOHHQ9BU89 302 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 NDE1Q9NXR1 346 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 KLRF1Q9NZS2 232 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 ELOVL7A1L3X0 281 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 SCO2O43819 266 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 BCAS1O75363 584 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-204ENST00000401473 TRIM3O75382 744 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-204ENST00000401473 TCN1P20061 433 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-204ENST00000401473 RPS4Y1P22090 263 aaKnown RBP14.57□□□□□ -0.08
HMGA1-204ENST00000401473 RFC3P40938 356 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 KCNJ2P63252 427 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 HPCAP84074 193 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 PLAURQ03405 335 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 TMEM178AQ8NBL3 297 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 HIPK4Q8NE63 616 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 GNRHR2Q96P88 292 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 TAAR6Q96RI8 345 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 BTBD10Q9BSF8 475 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 SPATA9Q9BWV2 254 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 HOXD1Q9GZZ0 328 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 CALML5Q9NZT1 146 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 ABCG2Q9UNQ0 655 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 KLF13Q9Y2Y9 288 aaPredicted RBP14.57□□□□□ -0.08
HMGA1-204ENST00000401473 CHST2Q9Y4C5 530 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 DTNAQ9Y4J8 743 aa14.57□□□□□ -0.08
HMGA1-204ENST00000401473 FAM220BPB1ANY3 271 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 C5orf58C9J3I9 102 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 M0QX08 132 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 SCDO00767 359 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 WISP2O76076 250 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 ANGPTL1O95841 491 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 HPGDP15428 266 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 PCGF2P35227 344 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 RPP38P78345 283 aaKnown RBP14.56□□□□□ -0.08
HMGA1-204ENST00000401473 PMP22Q01453 160 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 VEZF1Q14119 521 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 GNA13Q14344 377 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 RNFT1Q5M7Z0 435 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 PRAMEF8Q5VWM4 474 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 PRAMEF7Q5VXH5 474 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 SLC30A6Q6NXT4 461 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 VRK2Q86Y07 508 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 ZNF614Q8N883 585 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 CLPTM1LQ96KA5 538 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 KLHDC3Q9BQ90 382 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 FAM173AQ9BQD7 235 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 OSBPL11Q9BXB4 747 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 TBL1XR1Q9BZK7 514 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 RLIMQ9NVW2 624 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 TUBA8Q9NY65 449 aaPredicted RBP14.56□□□□□ -0.08
HMGA1-204ENST00000401473 AP3M1Q9Y2T2 418 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 WIF1Q9Y5W5 379 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 GPC6Q9Y625 555 aaPredicted RBP14.56□□□□□ -0.08
HMGA1-204ENST00000401473 ZGRF1Q86YA3 2104 aa14.56□□□□□ -0.08
HMGA1-204ENST00000401473 A0A1W2PQD3 144 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 KLRC4-KLRK1H3BQV0 150 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 GYG2O15488 501 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 NDUFB5O43674 189 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 C1QL1O75973 258 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 SNX4O95219 450 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 RFPL3SP0C7P2 107 aa14.55□□□□□ -0.08
HMGA1-204ENST00000401473 ETS2P15036 469 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms