RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 EXOGQ9Y2C4 368 aaKnown RBP16.46■□□□□ 0.23
HLA-DQB1-204ENST00000399084 UNC119BA6NIH7 251 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SGK494L7N484 410 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 GPX5O75715 221 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 UPK1BO75841 260 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 THY1P04216 161 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ADRA2AP08913 450 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 HBQ1P09105 142 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 BMP7P18075 431 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CD38P28907 300 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 RBM34P42696 430 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CAPZBP47756 277 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 RORCP51449 518 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CTBP2P56545 445 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 RACK1P63244 317 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 OR1Q1Q15612 314 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 MRPL2Q5T653 305 aaKnown RBP16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 MED25Q71SY5 747 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 WDR53Q7Z5U6 358 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 C17orf82Q86X59 251 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 TMEM52Q8NDY8 209 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 OR5T3Q8NGG3 340 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 OR52L1Q8NGH7 329 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 OR8D4Q8NGM9 314 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 TMEM239Q8WW34 195 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 PRSS27Q9BQR3 290 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 MED18Q9BUE0 208 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 G6PC3Q9BUM1 346 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 TRIM2Q9C040 744 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SP140LQ9H930 580 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 LMAN1LQ9HAT1 526 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CLEC2DQ9UHP7 191 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 PLCL2Q9UPR0 1127 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 IL1AP01583 271 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CELA2BP08218 269 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CKMT1AP12532 417 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 HTR1FP30939 366 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CRYBB2P43320 205 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 BCAP31P51572 246 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 HSD17B7P56937 341 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 PLK5Q496M5 336 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ZNF542PQ5EBM4 170 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SPANXN2Q5MJ10 180 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 Q6ZS52 159 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ARL14Q8N4G2 192 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 TMEM255BQ8WV15 326 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 PRR14Q9BWN1 585 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ASPNQ9BXN1 380 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 C6orf62Q9GZU0 229 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 FAM60AQ9NP50 221 aa16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ZNF223Q9UK11 482 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQB1-204ENST00000399084 A0A1W2PR77 199 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 FUOMA2VDF0 154 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 B4DGG1 531 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ZNF749O43361 778 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 RDH16O75452 317 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 KCNK2O95069 426 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CBX7O95931 251 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 PROS1P07225 676 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 TSPAN19P0C672 248 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 GNSP15586 552 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 TYRP1P17643 537 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 S1PR1P21453 382 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 GALP22466 123 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CAPZA2P47755 286 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 EPHA4P54764 986 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CDH11P55287 796 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 LSM11P83369 360 aaKnown RBP eCLIP16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ID2Q02363 134 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 STX4Q12846 297 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 C1orf61Q13536 156 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ATP1A4Q13733 1029 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SERTAD2Q14140 314 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 MAPK14Q16539 360 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 PLEKHG7Q6ZR37 379 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ZNF550Q7Z398 422 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 OR9A4Q8NGU2 314 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 RIT1Q92963 219 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 NELL2Q99435 816 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 TMEM74BQ9NUR3 256 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SIDT1Q9NXL6 827 aaKnown RBP16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 DOLKQ9UPQ8 538 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 MED31Q9Y3C7 131 aa16.44■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SLC9B1P1A6NJY1 282 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 H0YIG0 161 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 MAGEB3O15480 346 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 PRAMEF2O60811 474 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 TGFBR1P36897 503 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ETV5P41161 510 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ETV1P50549 477 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 BDH1Q02338 343 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 RUNX1T1Q06455 604 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CDC20Q12834 499 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ZNF155Q12901 538 aaPredicted RBP16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 GPR50Q13585 617 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ZNF141Q15928 474 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 AMZ1Q400G9 498 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CCNJQ5T5M9 372 aa16.43■□□□□ 0.22
HLA-DQB1-204ENST00000399084 OGFOD3Q6PK18 319 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms