RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 SLC19A2O60779 497 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 UBXN7O94888 489 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 CKBP12277 381 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 PPP2R1BP30154 601 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 NUP62P37198 522 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 TAP2Q03519 686 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 TMEM115Q12893 351 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 CRHR2Q13324 411 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 FGL2Q14314 439 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 TRIM71Q2Q1W2 868 aaKnown RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 COL28A1Q2UY09 1125 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 C17orf107Q6ZR85 190 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 NKAIN4Q8IVV8 208 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 ZNF671Q8TAW3 534 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 APOBEC4Q8WW27 367 aaKnown RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 C16orf58Q96GQ5 468 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 SEC22CQ9BRL7 303 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 FAIM2Q9BWQ8 316 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 NT5DC2Q9H857 520 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 DLL4Q9NR61 685 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 MAN2C1Q9NTJ4 1040 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 MRPL39Q9NYK5 338 aaKnown RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 WSB2Q9NYS7 404 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 OTOFQ9HC10 1997 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 TDRD15B5MCY1 1934 aaKnown RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 H3BSH0 61 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 SMAD9O15198 467 aaKnown RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 PIP5K1CO60331 668 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 ATG13O75143 517 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 APOC3P02656 99 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 GYPBP06028 91 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 RECQLP46063 649 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 CLDN2P57739 230 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 CDK5Q00535 292 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 E2F1Q01094 437 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 MINDY4Q4G0A6 757 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 ARHGAP15Q53QZ3 475 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 METAP1DQ6UB28 335 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 VRK2Q86Y07 508 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 NRMQ8IXM6 262 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 ARIH2OSQ8N7S6 290 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 TMEM99Q8N816 258 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 OR4Q3Q8NH05 313 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 RPLP0P6Q8NHW5 317 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 CYB5D2Q8WUJ1 264 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 SLC5A11Q8WWX8 675 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 ZNF837Q96EG3 531 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 SCMH1Q96GD3 660 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 SAMD8Q96LT4 415 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 OR2AG1Q9H205 316 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 PPA2Q9H2U2 334 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 SAV1Q9H4B6 383 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 SDHAF2Q9NX18 166 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 ASF1AQ9Y294 204 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 GPR55Q9Y2T6 319 aaPredicted RBP9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 KCNE3Q9Y6H6 103 aa9.24□□□□□ -0.93
PTCHD4-202ENST00000398738 CDH23Q9H251 3354 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 DAPL1A0PJW8 107 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 H7BY64 318 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 PLPP1O14494 284 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 SLC16A5O15375 505 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 RNF13O43567 381 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 SLCO2B1O94956 709 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 WNT1P04628 370 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 GALTP07902 379 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 HOXD4P09016 255 aaPredicted RBP9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 RRASP10301 218 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 IL32P24001 234 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 PSMB5P28074 263 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 VEGFCP49767 419 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 BTG1P62324 171 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 TCTE1Q5JU00 501 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 SFXN4Q6P4A7 337 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 C22orf39Q6P5X5 142 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 Q6ZTK2 550 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 STPG2Q8N412 459 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 CYB561A3Q8NBI2 242 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 OR13H1Q8NG92 308 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 TOE1Q96GM8 510 aaKnown RBP9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 SLC35G5Q96KT7 338 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 PRAP1Q96NZ9 151 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 ERMAPQ96PL5 475 aaPredicted RBP9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 EMC7Q9NPA0 242 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 MYNNQ9NPC7 610 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 CYSLTR2Q9NS75 346 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 A0A1W2PS29 197 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 EFCAB14O75071 495 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 SIX6O95475 246 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 EOMESO95936 686 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 TFP02787 698 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 HCCSP53701 268 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 MAZP56270 477 aaKnown RBP9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 OPCMLQ14982 345 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 CLLU1Q5K131 121 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 EOGTQ5NDL2 527 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 ZNF322Q6U7Q0 402 aaPredicted RBP9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 LINGO2Q7L985 606 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 LRRC28Q86X40 367 aaPredicted RBP9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 TBC1D19Q8N5T2 526 aa9.23□□□□□ -0.93
PTCHD4-202ENST00000398738 LSM14AQ8ND56 463 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms