RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 NPIPA8P0DM63 369 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 EEF1A1P68104 462 aaKnown RBP21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 KCNJ10P78508 379 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 ZNF791Q3KP31 576 aaPredicted RBP21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 KLHL26Q53HC5 615 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 AGAP7PQ5VUJ5 663 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 FCRLBQ6BAA4 426 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 TMEM81Q6P7N7 255 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 ZNF836Q6ZNA1 936 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 VTCN1Q7Z7D3 282 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 ZNF440Q8IYI8 595 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 AMER2Q8N7J2 671 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 GPR32P1Q8NGA4 272 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 OR4C3Q8NH37 302 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 PYDC1Q8WXC3 89 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 HGDQ93099 445 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 ZG16BQ96DA0 208 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 AGAP4Q96P64 663 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 KCNE5Q9UJ90 142 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 SEMG1P04279 462 aa21.64■■□□□ 1.05
TSPAN4-202ENST00000397396 IFNW1P05000 195 aa21.64■■□□□ 1.05
TSPAN4-202ENST00000397396 FABP3P05413 133 aa21.64■■□□□ 1.05
TSPAN4-202ENST00000397396 EVI2BP34910 448 aa21.64■■□□□ 1.05
TSPAN4-202ENST00000397396 FBXW4P57775 412 aa21.64■■□□□ 1.05
TSPAN4-202ENST00000397396 MAPK14Q16539 360 aa21.64■■□□□ 1.05
TSPAN4-202ENST00000397396 MRPL2Q5T653 305 aaKnown RBP21.64■■□□□ 1.05
TSPAN4-202ENST00000397396 GRAMD2AQ8IUY3 354 aa21.64■■□□□ 1.05
TSPAN4-202ENST00000397396 FAM86B1Q8N7N1 296 aa21.64■■□□□ 1.05
TSPAN4-202ENST00000397396 IL1RAPQ9NPH3 570 aa21.64■■□□□ 1.05
TSPAN4-202ENST00000397396 SH3GLB1Q9Y371 365 aa21.64■■□□□ 1.05
TSPAN4-202ENST00000397396 CDHR4A6H8M9 788 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 TMEM229AB2RXF0 380 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 ZNF354AO60765 605 aaPredicted RBP21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 OR6B1O95007 311 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 MAGEA2P43356 314 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 HLCSP50747 726 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 SNTA1Q13424 505 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 DEFB109BQ30KR1 87 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 ISLR2Q6UXK2 745 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 RTL4Q6ZR62 310 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 ZDHHC21Q8IVQ6 265 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 NR4A3Q92570 626 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 ARHGDIGQ99819 225 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 CHID1Q9BWS9 393 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 GPR83Q9NYM4 423 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 STMN3Q9NZ72 180 aa21.63■■□□□ 1.05
TSPAN4-202ENST00000397396 PRAMEF25A6NGN4 478 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 KRT36O76013 467 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 CSTAP01040 98 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 CYB561P49447 251 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 NRF1Q16656 503 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 B3GNTL1Q67FW5 361 aaPredicted RBP21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 IL20RBQ6UXL0 311 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 ZNF550Q7Z398 422 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 PIWIL3Q7Z3Z3 882 aaKnown RBP21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 HMGN2P46Q86SG4 172 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 CYP4Z1Q86W10 505 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 CARM1Q86X55 608 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 BEST3Q8N1M1 668 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 POGLUT1Q8NBL1 392 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 RNF138Q8WVD3 245 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 DCBLD2Q96PD2 775 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 ZNF347Q96SE7 839 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 METTL7AQ9H8H3 244 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 EXOSC3Q9NQT5 275 aaKnown RBP21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 SDHAF3Q9NRP4 125 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 CNIH4Q9P003 139 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 PRDM4Q9UKN5 801 aa21.62■■□□□ 1.05
TSPAN4-202ENST00000397396 CENPVL1A0A0U1RR11 272 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 TMEM8BA6NDV4 472 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 NDUFB5O43674 189 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 FADS1O60427 444 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 TPST1O60507 370 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 CAPNS1P04632 268 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 UBL4AP11441 157 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 IFNA8P32881 189 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 TMPRSS3P57727 454 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 RGS8P57771 180 aaPredicted RBP21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 TLE3Q04726 772 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 RCN1Q15293 331 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 UNQ6494/PRO21346Q6UXR6 183 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 RANBP3LQ86VV4 465 aaPredicted RBP21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 CYP4Z2PQ8N1L4 340 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 OR10G3Q8NGC4 313 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 OR5M3Q8NGP4 307 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 OR10Q1Q8NGQ4 319 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 PHOSPHO1Q8TCT1 267 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 APOBEC4Q8WW27 367 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 SLCO4A1Q96BD0 722 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 UTP23Q9BRU9 249 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 POLR2J2Q9GZM3 115 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 RNF32Q9H0A6 362 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 POLR2J3Q9H1A7 115 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 KLRF1Q9NZS2 232 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 FAM32AQ9Y421 112 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 KCNMB2Q9Y691 235 aa21.61■■□□□ 1.05
TSPAN4-202ENST00000397396 GTPBP1O00178 669 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-202ENST00000397396 MAN1A2O60476 641 aa21.6■■□□□ 1.05
TSPAN4-202ENST00000397396 EIF4E2O60573 245 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-202ENST00000397396 UQCRBP14927 111 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms