RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 GIMAP5Q96F15 307 aa12.43□□□□□ -0.42
CXCL12-205ENST00000395794 STACQ99469 402 aa12.43□□□□□ -0.42
CXCL12-205ENST00000395794 PAIP2Q9BPZ3 127 aaKnown RBP12.43□□□□□ -0.42
CXCL12-205ENST00000395794 ACTRT3Q9BYD9 372 aa12.43□□□□□ -0.42
CXCL12-205ENST00000395794 BHLHE41Q9C0J9 482 aaPredicted RBP12.43□□□□□ -0.42
CXCL12-205ENST00000395794 NEUROD4Q9HD90 331 aa12.43□□□□□ -0.42
CXCL12-205ENST00000395794 DUSP22Q9NRW4 184 aa12.43□□□□□ -0.42
CXCL12-205ENST00000395794 DNAJB12Q9NXW2 375 aaKnown RBP12.43□□□□□ -0.42
CXCL12-205ENST00000395794 CRIM1Q9NZV1 1036 aa12.43□□□□□ -0.42
CXCL12-205ENST00000395794 RAP2CQ9Y3L5 183 aa12.43□□□□□ -0.42
CXCL12-205ENST00000395794 ZNF337Q9Y3M9 751 aa12.43□□□□□ -0.42
CXCL12-205ENST00000395794 ACTL7BQ9Y614 415 aa12.43□□□□□ -0.42
CXCL12-205ENST00000395794 CSMD1Q96PZ7 3565 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 A0A087WZY1 265 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 OR2M5A3KFT3 312 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 SEC14L5O43304 696 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 ITM2AO43736 263 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 OXSR1O95747 527 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-205ENST00000395794 C6orf47O95873 294 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 CRHP06850 196 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 RPL14P50914 215 aaKnown RBP12.42□□□□□ -0.42
CXCL12-205ENST00000395794 ZNF41P51814 821 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-205ENST00000395794 SORDQ00796 357 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 FOXF2Q12947 444 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 STX3Q13277 289 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 SGCBQ16585 318 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 HHATQ5VTY9 493 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 LUZP2Q86TE4 346 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 GCNT2Q8N0V5 402 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 KRTCAP2Q8N6L1 136 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 ZNF781Q8N8C0 355 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 ZNF527Q8NB42 609 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 OR5M1Q8NGP8 315 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 FAM110BQ8TC76 370 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 SMPDL3BQ92485 455 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 OTUB1Q96FW1 271 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-205ENST00000395794 PGM2Q96G03 612 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 PPP1R36Q96LQ0 422 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 DUSP26Q9BV47 211 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 RBM24Q9BX46 236 aaKnown RBP12.42□□□□□ -0.42
CXCL12-205ENST00000395794 POLDIP3Q9BY77 421 aaKnown RBP12.42□□□□□ -0.42
CXCL12-205ENST00000395794 RTN4RQ9BZR6 473 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 HOXD1Q9GZZ0 328 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 PIGUQ9H490 435 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 SIRT3Q9NTG7 399 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-205ENST00000395794 GIN1Q9NXP7 522 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 CLCF1Q9UBD9 225 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 PACSIN3Q9UKS6 424 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 PCDHGB4Q9UN71 923 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 AP4B1Q9Y6B7 739 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 HCFC1P51610 2035 aa12.42□□□□□ -0.42
CXCL12-205ENST00000395794 UQCRHLA0A096LP55 91 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 B4DXG7 233 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 H3BNH8 94 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 HCRTR2O43614 444 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 TNFRSF21O75509 655 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 CTAG2O75638 210 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 SOAT1P35610 550 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 CLDN8P56748 225 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 CDC73Q6P1J9 531 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 APOOLQ6UXV4 268 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 WDR75Q8IWA0 830 aaKnown RBP12.41□□□□□ -0.42
CXCL12-205ENST00000395794 CNEP1R1Q8N9A8 125 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 GATSQ8NAP1 163 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 VPS37AQ8NEZ2 397 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 SFXN5Q8TD22 340 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 ACTRT2Q8TDY3 377 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 CDS1Q92903 461 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 ZBTB8AQ96BR9 441 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 PINK1Q9BXM7 581 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 PRRG4Q9BZD6 226 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 CLEC4MQ9H2X3 399 aaPredicted RBP12.41□□□□□ -0.42
CXCL12-205ENST00000395794 ZNF395Q9H8N7 513 aaPredicted RBP12.41□□□□□ -0.42
CXCL12-205ENST00000395794 AKTIPQ9H8T0 292 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 ASIC5Q9NY37 505 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 JKAMPQ9P055 326 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 VDAC3Q9Y277 283 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 PDZD2O15018 2839 aa12.41□□□□□ -0.42
CXCL12-205ENST00000395794 A6NNC1 897 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 ERLIN1O75477 346 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 SMNDC1O75940 238 aaKnown RBP eCLIP12.4□□□□□ -0.42
CXCL12-205ENST00000395794 TGM6O95932 706 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 EPXP11678 715 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 FCGR2AP12318 317 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 ZNF17P17021 662 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 BGNP21810 368 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 ME2P23368 584 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 C21orf58P58505 322 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 FGFBP1Q14512 234 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 CCNJQ5T5M9 372 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 PPP4R4Q6NUP7 873 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 PLXDC2Q6UX71 529 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 RIMKLAQ8IXN7 391 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 ANKRD42Q8N9B4 389 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 B4GALNT2Q8NHY0 566 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 PSMA8Q8TAA3 256 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 ZBTB9Q96C00 473 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 SH3YL1Q96HL8 342 aaPredicted RBP12.4□□□□□ -0.42
CXCL12-205ENST00000395794 GPATCH1Q9BRR8 931 aaKnown RBP12.4□□□□□ -0.42
CXCL12-205ENST00000395794 DPY30Q9C005 99 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms