RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 NUDT15Q9NV35 164 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 FABP12A6NFH5 140 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 FAM74A7A6NL05 159 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 ATP6V1G2-DDX39BF2Z307 99 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 PRAMEF26H0Y7S4 382 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 PLPP1O14494 284 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 FLRT2O43155 660 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 F12P00748 615 aaPredicted RBP6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 IGF2P01344 180 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 APEHP13798 732 aaKnown RBP6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 EVX1P49640 407 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 TPMTP51580 245 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 AFF3P51826 1226 aaKnown RBP6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 TARDBPQ13148 414 aaKnown RBP eCLIP6.84□□□□□ -1.313e-7■■■□□ 16.3
GPCPD1-201ENST00000379019 TMEM52BQ4KMG9 183 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 FAM74A3Q4VXF1 159 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 THSD4Q6ZMP0 1018 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 ZNF793Q6ZN11 406 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 ZPLD1Q8TCW7 415 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 RELTQ969Z4 430 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 KLHL31Q9H511 634 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 KCNN3Q9UGI6 736 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 SAMD4AQ9UPU9 718 aaKnown RBP6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 A0A087WUU8 490 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 OR5K3A6NET4 321 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 J3QRE1 110 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 PSMD9O00233 223 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 IL3P08700 152 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 ANXA4P09525 319 aaPredicted RBP6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 GXYLT1Q4G148 440 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 ZNF544Q6NX49 715 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 Q6ZVU0 165 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 VWA5B2Q8N398 1253 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 TMEM99Q8N816 258 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 MENTQ9BUN1 341 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 GLTPQ9NZD2 209 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 NDOR1Q9UHB4 597 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 KIAA2026Q5HYC2 2103 aa6.84□□□□□ -1.31
GPCPD1-201ENST00000379019 SVILO95425 2214 aa6.84□□□□□ -1.32
GPCPD1-201ENST00000379019 IGLV3-16A0A075B6K0 115 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 A0A1B0GTH9 108 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 SLC22A23A1A5C7 686 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 C2orf81A6NN90 581 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 SHOXO15266 292 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 PRMT3O60678 531 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 VPS4BO75351 444 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 CTSBP07858 339 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 MPIP34949 423 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 BTN1A1Q13410 526 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 FHL1Q13642 323 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 SCARB2Q14108 478 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 ZDHHC20Q5W0Z9 365 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 LRFN4Q6PJG9 635 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 RAB43Q86YS6 212 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 TMEM132CQ8N3T6 1108 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 ZNF527Q8NB42 609 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 AVL9Q8NBF6 648 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 UBTD2Q8WUN7 234 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 DPCDQ9BVM2 203 aaPredicted RBP6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 SCN3BQ9NY72 215 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 TMCC3Q9ULS5 477 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 PRELID1Q9Y255 219 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 PCDHGA9Q9Y5G4 932 aaKnown RBP6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 A0A075B6Q4 140 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 GLYATL1P3A0A0U1RQE8 302 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 LRRN3E7EW58 273 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 CASC3O15234 703 aaKnown RBP6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 PPM1BO75688 479 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 CEACAM1P13688 526 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 AHRP35869 848 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 DHPSP49366 369 aaPredicted RBP6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 RPS21P63220 83 aaKnown RBP6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 TUBA1BP68363 451 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 CACNG1Q06432 222 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 XKR6Q5GH73 641 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 CD200R1LQ6Q8B3 271 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 TUBA1AQ71U36 451 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 TMEM151BQ8IW70 566 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 MINDY2Q8NBR6 621 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 OR11G2Q8NGC1 345 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 OR4A15Q8NGL6 344 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 TMEM19Q96HH6 336 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 DERL3Q96Q80 235 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 APOL4Q9BPW4 351 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 TMEM43Q9BTV4 400 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 LRRN3Q9H3W5 708 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 ELOVL6Q9H5J4 265 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 VPS29Q9UBQ0 182 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 KCNE5Q9UJ90 142 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 CABIN1Q9Y6J0 2220 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 ABCA1O95477 2261 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 MAP1AP78559 2803 aaPredicted RBP6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 PGRMC2O15173 223 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 SIX6O95475 246 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 CELP19835 753 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 PRPH2P23942 346 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 PBLDP30039 288 aaPredicted RBP6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 RRAS2P62070 204 aaPredicted RBP6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 PUDPQ08623 228 aa6.83□□□□□ -1.32
GPCPD1-201ENST00000379019 ARMC4Q5T2S8 1044 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms