RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 DUX1O43812 170 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 STX11O75558 287 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 CSN2P05814 226 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 IGHV4-34P06331 123 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 RETP07949 1114 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 PRSS12P56730 875 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 GMFBP60983 142 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 SKP1P63208 163 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 KCNJ10P78508 379 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 ST3GAL3Q11203 375 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 FADDQ13158 208 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 MAPK14Q16539 360 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 NSMAFQ92636 917 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 ZDHHC12Q96GR4 267 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 SLC41A3Q96GZ6 507 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 DIRAS2Q96HU8 199 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 DMRTB1Q96MA1 342 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 COG8Q96MW5 612 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 CD180Q99467 661 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 MGLLQ99685 303 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 SH3GL3Q99963 347 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 CRB3Q9BUF7 120 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 CCDC86Q9H6F5 360 aaKnown RBP7.55□□□□□ -1.2
CKAP2-203ENST00000378037 C1GALT1Q9NS00 363 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 SEMA4GQ9NTN9 838 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 SLC17A4Q9Y2C5 497 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 PCDHGA2Q9Y5H1 932 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 PATJQ8NI35 1801 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 DUXAA6NLW8 204 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 LOC110117498-PIK3R3F6TDL0 507 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 DENRO43583 198 aaKnown RBP7.55□□□□□ -1.2
CKAP2-203ENST00000378037 PLOD3O60568 738 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 UGDHO60701 494 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 ABCB7O75027 752 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 PLATP00750 562 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 PRKAR1AP10644 381 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 MMP11P24347 488 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 CRHBPP24387 322 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 IFNGR2P38484 337 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 MAGEB1P43366 347 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 PUM1Q14671 1186 aaKnown RBP eCLIP7.55□□□□□ -1.2
CKAP2-203ENST00000378037 MICAQ29983 383 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 PYDC2Q56P42 97 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 IDNKQ5T6J7 187 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 ACSM5Q6NUN0 579 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 SLC48A1Q6P1K1 146 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 ZNF773Q6PK81 442 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 DGAT2L6Q6ZPD8 337 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 PRICKLE2Q7Z3G6 844 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 APLFQ8IW19 511 aaPredicted RBP7.55□□□□□ -1.2
CKAP2-203ENST00000378037 GJD3Q8N144 294 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 CLDN22Q8N7P3 220 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 OR4C3Q8NH37 302 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 DIO2Q92813 273 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 SENP5Q96HI0 755 aaPredicted RBP7.55□□□□□ -1.2
CKAP2-203ENST00000378037 ZNF354BQ96LW1 612 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 NPLQ9BXD5 320 aaPredicted RBP7.55□□□□□ -1.2
CKAP2-203ENST00000378037 PLA2G12AQ9BZM1 189 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 GORASP2Q9H8Y8 452 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 FAM86C1Q9NVL1 165 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 GNG8Q9UK08 70 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 DTX4Q9Y2E6 619 aa7.55□□□□□ -1.2
CKAP2-203ENST00000378037 SH3PXD2BA1X283 911 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 OR5K3A6NET4 321 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 EIF3FO00303 357 aaPredicted RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 WNT1P04628 370 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 JMJD7P0C870 316 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 ARAFP10398 606 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 FOLR1P15328 257 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 FBLP22087 321 aaKnown RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 CCNOP22674 350 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 PSMA1P25786 263 aaKnown RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 BMP8BP34820 402 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 RPS5P46782 204 aaKnown RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 DYNC1I2Q13409 638 aaKnown RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 DGUOKQ16854 277 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 ZBED5Q49AG3 693 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 GGTA1PQ4G0N0 100 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 WDR45BQ5MNZ6 344 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 RSBN1Q5VWQ0 802 aaPredicted RBP7.54□□□□□ -1.2
CKAP2-203ENST00000378037 SLC35D2Q76EJ3 337 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 ARHGAP22Q7Z5H3 698 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 BMP8AQ7Z5Y6 402 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 NLRP8Q86W28 1048 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 RIMKLAQ8IXN7 391 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 SLC35F3Q8IY50 421 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 ENTHD1Q8IYW4 607 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 PROKR2Q8NFJ6 384 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 FANK1Q8TC84 345 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 DUSP19Q8WTR2 217 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 GAL3ST3Q96A11 431 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 CCDC74AQ96AQ1 378 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 TBC1D20Q96BZ9 403 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 COX14Q96I36 57 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 MBOAT4Q96T53 435 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 ACTRT3Q9BYD9 372 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 OR11A1Q9GZK7 315 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 MUC13Q9H3R2 512 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 METTL7AQ9H8H3 244 aa7.54□□□□□ -1.2
CKAP2-203ENST00000378037 AKIRIN1Q9H9L7 192 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms