RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 CITED4Q96RK1 184 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 MENTQ9BUN1 341 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 CFHR5Q9BXR6 569 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 BTBD1Q9H0C5 482 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 ENKD1Q9H0I2 346 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 TMEM74BQ9NUR3 256 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 EXTL2Q9UBQ6 330 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 OBSL1O75147 1896 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 TRAV6A0A075B6T7 132 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 A0A1W2PRG6 482 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 ARRDC5A6NEK1 342 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 PROM1O43490 865 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 PAHP00439 452 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 DSG2Q14126 1118 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 SAMD12Q8N8I0 201 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 OR13C2Q8NGS9 318 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 FANK1Q8TC84 345 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 PTCHD1Q96NR3 888 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 OR52D1Q9H346 318 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 NKIRAS2Q9NYR9 191 aa12.07□□□□□ -0.48
USP11-204ENST00000377107 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.07□□□□□ -0.48
USP11-204ENST00000377107 B3GALT2O43825 422 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 IL1AP01583 271 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 HLA-DPB1P04440 258 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 HOXB2P14652 356 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 C5AR1P21730 350 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 PEBP1P30086 187 aaKnown RBP12.06□□□□□ -0.48
USP11-204ENST00000377107 NAA10P41227 235 aaPredicted RBP12.06□□□□□ -0.48
USP11-204ENST00000377107 CCR4P51679 360 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 CDK5Q00535 292 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 ZNF155Q12901 538 aaPredicted RBP12.06□□□□□ -0.48
USP11-204ENST00000377107 PGGHGQ32M88 737 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 SNAP47Q5SQN1 464 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 GDPGP1Q6ZNW5 385 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 OR6F1Q8NGZ6 308 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 ACOT11Q8WXI4 607 aaPredicted RBP12.06□□□□□ -0.48
USP11-204ENST00000377107 OR1E3Q8WZA6 343 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 FGF14Q92915 247 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 RERGQ96A58 199 aaPredicted RBP12.06□□□□□ -0.48
USP11-204ENST00000377107 SIPA1Q96FS4 1042 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 OR2M4Q96R27 311 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 CD180Q99467 661 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 CTRCQ99895 268 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 RPRD1BQ9NQG5 326 aaKnown RBP12.06□□□□□ -0.48
USP11-204ENST00000377107 FBXL4Q9UKA2 621 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 EXOSC1Q9Y3B2 195 aaKnown RBP12.06□□□□□ -0.48
USP11-204ENST00000377107 CPEP16870 476 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 GRPRP30550 384 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 TALDO1P37837 337 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 TEKQ02763 1124 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 MAPK14Q16539 360 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 MINDY4Q4G0A6 757 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 PRPF38BQ5VTL8 546 aaKnown RBP12.06□□□□□ -0.48
USP11-204ENST00000377107 SIRT6Q8N6T7 355 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 TMEM99Q8N816 258 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 GATSQ8NAP1 163 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 TEX101Q9BY14 249 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 CRISPLD2Q9H0B8 497 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 C20orf141Q9NUB4 165 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 ZNF443Q9Y2A4 671 aaPredicted RBP12.06□□□□□ -0.48
USP11-204ENST00000377107 GRIP1Q9Y3R0 1128 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 ARHGEF17Q96PE2 2063 aaPredicted RBP12.06□□□□□ -0.48
USP11-204ENST00000377107 FAM171A2A8MVW0 826 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 PRKAR1AP10644 381 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 CHRNB1P11230 501 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 SHC1P29353 583 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 PYCR1P32322 319 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 MAP2K3P46734 347 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 C3orf38Q5JPI3 329 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 MRPL2Q5T653 305 aaKnown RBP12.06□□□□□ -0.48
USP11-204ENST00000377107 UBQLN3Q9H347 655 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 ZSCAN32Q9NX65 697 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 CALML5Q9NZT1 146 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 ADAM29Q9UKF5 820 aa12.06□□□□□ -0.48
USP11-204ENST00000377107 MRPS2Q9Y399 296 aaKnown RBP12.06□□□□□ -0.48
USP11-204ENST00000377107 TRIOO75962 3097 aa12.05□□□□□ -0.48
USP11-204ENST00000377107 PRSS38A1L453 326 aa12.05□□□□□ -0.48
USP11-204ENST00000377107 DUXAA6NLW8 204 aa12.05□□□□□ -0.48
USP11-204ENST00000377107 E9PQ18 207 aa12.05□□□□□ -0.48
USP11-204ENST00000377107 POLR1CO15160 346 aaPredicted RBP12.05□□□□□ -0.48
USP11-204ENST00000377107 CASC3O15234 703 aaKnown RBP12.05□□□□□ -0.48
USP11-204ENST00000377107 KLF8O95600 359 aaPredicted RBP12.05□□□□□ -0.48
USP11-204ENST00000377107 RPL4P36578 427 aaKnown RBP12.05□□□□□ -0.48
USP11-204ENST00000377107 KIR2DL3P43628 341 aa12.05□□□□□ -0.48
USP11-204ENST00000377107 VSX2P58304 361 aaPredicted RBP12.05□□□□□ -0.48
USP11-204ENST00000377107 IFITM2Q01629 132 aa12.05□□□□□ -0.48
USP11-204ENST00000377107 MRPL28Q13084 256 aaKnown RBP12.05□□□□□ -0.48
USP11-204ENST00000377107 ERV3-1Q14264 604 aa12.05□□□□□ -0.48
USP11-204ENST00000377107 XKRXQ6PP77 449 aa12.05□□□□□ -0.48
USP11-204ENST00000377107 ZNF836Q6ZNA1 936 aa12.05□□□□□ -0.48
USP11-204ENST00000377107 RANBP3LQ86VV4 465 aaPredicted RBP12.05□□□□□ -0.48
USP11-204ENST00000377107 FAM98AQ8NCA5 519 aaKnown RBP12.05□□□□□ -0.48
USP11-204ENST00000377107 HERVK_113Q902F9 699 aa12.05□□□□□ -0.48
USP11-204ENST00000377107 ALG8Q9BVK2 526 aa12.05□□□□□ -0.48
USP11-204ENST00000377107 HCAR1Q9BXC0 346 aa12.05□□□□□ -0.48
USP11-204ENST00000377107 C1QTNF7Q9BXJ2 289 aa12.05□□□□□ -0.48
USP11-204ENST00000377107 MDC1Q14676 2089 aaKnown RBP12.05□□□□□ -0.48
USP11-204ENST00000377107 P2RX6O15547 441 aa12.05□□□□□ -0.48
USP11-204ENST00000377107 ZIC2O95409 532 aaPredicted RBP12.05□□□□□ -0.48
USP11-204ENST00000377107 FCER2P06734 321 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms