RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 UBQLN4Q9NRR5 601 aa12.91□□□□□ -0.34
CLCN6-203ENST00000376490 PCDHGB4Q9UN71 923 aa12.91□□□□□ -0.34
CLCN6-203ENST00000376490 ZNF337Q9Y3M9 751 aa12.91□□□□□ -0.34
CLCN6-203ENST00000376490 DCHS2Q6V1P9 2916 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 IGLV3-32A0A0A0MS00 114 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 NPIPA5A0A0B4J1W7 369 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 PRSS51A0A1B0GVH4 220 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 MBD3L4A6NDZ8 208 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-203ENST00000376490 MBD3L3A6NE82 208 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-203ENST00000376490 MBD3L5A6NJ08 208 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-203ENST00000376490 TRPC5OSA6NMA1 111 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 CLCA1A8K7I4 914 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 SHISA8B8ZZ34 492 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 NPIPA7E9PJI5 369 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 NGFRP08138 427 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 NPIPA8P0DM63 369 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 HPGDP15428 266 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 ZNF708P17019 499 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 IGFBP2P18065 325 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 MATN1P21941 496 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 BMP5P22003 454 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 ZNF136P52737 540 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 CASP9P55211 416 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 RPS26P62854 115 aaKnown RBP12.9□□□□□ -0.34
CLCN6-203ENST00000376490 SPANXN4Q5MJ08 99 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 ARSKQ6UWY0 536 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 SPATA19Q7Z5L4 167 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 ADGRE4PQ86SQ3 457 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 UBQLNLQ8IYU4 475 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 C9orf106Q8NAJ2 232 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 RELL2Q8NC24 303 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-203ENST00000376490 OR5D16Q8NGK9 328 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 OR4A15Q8NGL6 344 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 MBD3L2Q8NHZ7 208 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-203ENST00000376490 TESCQ96BS2 214 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 C1GALT1C1Q96EU7 318 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 TREX2Q9BQ50 279 aaPredicted RBP12.9□□□□□ -0.34
CLCN6-203ENST00000376490 SERHL2Q9H4I8 314 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 NEUROD4Q9HD90 331 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 AIG1Q9NVV5 245 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 ABCA12Q86UK0 2595 aa12.9□□□□□ -0.34
CLCN6-203ENST00000376490 OR2M5A3KFT3 312 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 C9JVG2 144 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 SLCO1B7G3V0H7 640 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 SCDO00767 359 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 KRT16P08779 473 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 PEPDP12955 493 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 IL12AP29459 219 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 LCN1P31025 176 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 S100A3P33764 101 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 RNF144AP50876 292 aaPredicted RBP12.89□□□□□ -0.35
CLCN6-203ENST00000376490 DGKQP52824 942 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 SUCLG1P53597 346 aaKnown RBP12.89□□□□□ -0.35
CLCN6-203ENST00000376490 CLNS1AP54105 237 aaKnown RBP12.89□□□□□ -0.35
CLCN6-203ENST00000376490 DLX5P56178 289 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 CLDN15P56746 228 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 FOXF2Q12947 444 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 SNTB1Q13884 538 aaKnown RBP12.89□□□□□ -0.35
CLCN6-203ENST00000376490 GANABQ14697 944 aaKnown RBP12.89□□□□□ -0.35
CLCN6-203ENST00000376490 BCL2A1Q16548 175 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 SLC25A35Q3KQZ1 300 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 FAM174BQ3ZCQ3 159 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 SLC9B1Q4ZJI4 515 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 TTMPQ5BVD1 217 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 DCST2Q5T1A1 773 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 ANXA8L1Q5VT79 327 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 RAET1LQ5VY80 246 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 NXNQ6DKJ4 435 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 GDF7Q7Z4P5 450 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 DMRTC2Q8IXT2 367 aaPredicted RBP12.89□□□□□ -0.35
CLCN6-203ENST00000376490 VPS37AQ8NEZ2 397 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 SH3YL1Q96HL8 342 aaPredicted RBP12.89□□□□□ -0.35
CLCN6-203ENST00000376490 ATP6V1G3Q96LB4 118 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 KLHDC3Q9BQ90 382 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 ZNF629Q9UEG4 869 aaPredicted RBP12.89□□□□□ -0.35
CLCN6-203ENST00000376490 VDAC3Q9Y277 283 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 GPR45Q9Y5Y3 372 aa12.89□□□□□ -0.35
CLCN6-203ENST00000376490 RNF103-CHMP3A0A140T963 221 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 A0A1W2PQD3 144 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 H0YC42 278 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 H3BML4 177 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 ZNF195O14628 629 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 DVL2O14641 736 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 KLF11O14901 512 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 SOX30O94993 753 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 C1QCP02747 245 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 ATP6V1C1P21283 382 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 UQCRC2P22695 453 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 CTSSP25774 331 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 TPD52P55327 224 aaPredicted RBP12.88□□□□□ -0.35
CLCN6-203ENST00000376490 CD226Q15762 336 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 GLYR1Q49A26 553 aaPredicted RBP12.88□□□□□ -0.35
CLCN6-203ENST00000376490 KLHL26Q53HC5 615 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 BHLHB9Q6PI77 547 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 MAVSQ7Z434 540 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 PIWIL2Q8TC59 973 aaKnown RBP12.88□□□□□ -0.35
CLCN6-203ENST00000376490 WNT2BQ93097 391 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 UCN2Q96RP3 112 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 SDF2Q99470 211 aa12.88□□□□□ -0.35
CLCN6-203ENST00000376490 NPAS1Q99742 590 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms