RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 HTR3DQ70Z44 454 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 VRK2Q86Y07 508 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 SNX33Q8WV41 574 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 DDX31Q9H8H2 851 aaKnown RBP11.36□□□□□ -0.59
NCDN-202ENST00000373243 WDR45Q9Y484 360 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 SLC22A7Q9Y694 548 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 TET1Q8NFU7 2136 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 NPIPA5A0A0B4J1W7 369 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 IGLON5A6NGN9 336 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 NPIPA7E9PJI5 369 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 SMAD9O15198 467 aaKnown RBP11.36□□□□□ -0.59
NCDN-202ENST00000373243 RNF224P0DH78 156 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 NPIPA8P0DM63 369 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 HOXB1P14653 301 aaPredicted RBP11.36□□□□□ -0.59
NCDN-202ENST00000373243 MAPK9P45984 424 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 HOXA1P49639 335 aaPredicted RBP11.36□□□□□ -0.59
NCDN-202ENST00000373243 CLDN2P57739 230 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 LGALS3BPQ08380 585 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 INSL4Q14641 139 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 TRAM2Q15035 370 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 MEDAGQ5VYS4 303 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 TIGD3Q6B0B8 471 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 LINGO2Q7L985 606 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 ZNF514Q96K75 400 aaPredicted RBP11.36□□□□□ -0.59
NCDN-202ENST00000373243 ZNF354BQ96LW1 612 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 SPOCK3Q9BQ16 436 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 MYNNQ9NPC7 610 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 NUDT15Q9NV35 164 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 HS3ST2Q9Y278 367 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 NAALAD2Q9Y3Q0 740 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 ADH1CP00326 375 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 RLN1P04808 185 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 GSTM3P21266 225 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 ZP3P21754 424 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 DNASE1P24855 282 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 SEC13P55735 322 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 ZNF79Q15937 498 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 TMEM88Q6PEY1 159 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 CEACAM19Q7Z692 300 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 RDH10Q8IZV5 341 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 TOMM5Q8N4H5 51 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 OR52I1Q8NGK6 324 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 ZNF296Q8WUU4 475 aaPredicted RBP11.36□□□□□ -0.59
NCDN-202ENST00000373243 SPRYD4Q8WW59 207 aaPredicted RBP11.36□□□□□ -0.59
NCDN-202ENST00000373243 LCN9Q8WX39 176 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 MCCC1Q96RQ3 725 aaPredicted RBP11.36□□□□□ -0.59
NCDN-202ENST00000373243 CRB3Q9BUF7 120 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 CHMP1AQ9HD42 196 aaPredicted RBP11.36□□□□□ -0.59
NCDN-202ENST00000373243 TMEM138Q9NPI0 162 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 NTNG1Q9Y2I2 539 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 A3GALT2U3KPV4 340 aa11.36□□□□□ -0.59
NCDN-202ENST00000373243 ZNF670-ZNF695F2Z2N8 137 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 PDCD5O14737 125 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 CFDP00746 253 aaPredicted RBP11.35□□□□□ -0.59
NCDN-202ENST00000373243 ADH5P11766 374 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 HPGDP15428 266 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 TLX1P31314 330 aaPredicted RBP11.35□□□□□ -0.59
NCDN-202ENST00000373243 SOX18P35713 384 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 MC3RP41968 323 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 ZNF124Q15973 351 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 OR4C6Q8NH72 309 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 YIPF5Q969M3 257 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 CXorf40BQ96DE9 158 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 LMLNQ96KR4 655 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 SRRQ9GZT4 340 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 PLCXD1Q9NUJ7 323 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 OTOFQ9HC10 1997 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 SIP14410 1827 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 A0A0A6YYJ9 748 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 IRGMA1A4Y4 181 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 PSMD9O00233 223 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 PLPP1O14494 284 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 PROM1O43490 865 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 OR10H2O60403 315 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 ABLIM3O94929 683 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 RPP14O95059 124 aaKnown RBP11.35□□□□□ -0.59
NCDN-202ENST00000373243 SYPP08247 313 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 CD3GP09693 182 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 ACSL1P33121 698 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 NAA10P41227 235 aaPredicted RBP11.35□□□□□ -0.59
NCDN-202ENST00000373243 PRLHRP49683 370 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 KIAA1024LP59773 190 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 PPP3R1P63098 170 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 SIM1P81133 766 aaPredicted RBP11.35□□□□□ -0.59
NCDN-202ENST00000373243 ETFDHQ16134 617 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 CLLU1Q5K131 121 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 PGBD2Q6P3X8 592 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 MS4A15Q8N5U1 240 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 NUP43Q8NFH3 380 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 OR56A3Q8NH54 315 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 BTBD1Q9H0C5 482 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 THSD1Q9NS62 852 aa11.35□□□□□ -0.59
NCDN-202ENST00000373243 RIIAD1A6NNX1 92 aa11.34□□□□□ -0.59
NCDN-202ENST00000373243 ZAR1LA6NP61 321 aa11.34□□□□□ -0.59
NCDN-202ENST00000373243 RGS11O94810 467 aa11.34□□□□□ -0.59
NCDN-202ENST00000373243 LATS1O95835 1130 aa11.34□□□□□ -0.59
NCDN-202ENST00000373243 GKN3PP0CG01 181 aa11.34□□□□□ -0.59
NCDN-202ENST00000373243 MLLT11Q13015 90 aaPredicted RBP11.34□□□□□ -0.59
NCDN-202ENST00000373243 NNATQ16517 81 aa11.34□□□□□ -0.59
NCDN-202ENST00000373243 C2orf27AQ580R0 203 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms